Gene Dfer_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3387 
Symbol 
ID8226966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4143557 
End bp4144330 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID644931218 
Producthypothetical protein 
Protein accessionYP_003087762 
Protein GI255037141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0845009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAT GTCAGTTTCC CGACGAAAAA GATGATACCG ACCCCATTGA AACGGGTACG 
ATCCAACTGC AATTCGACAA TATCGCAGGC AACCAGGATT TACAGCTCGA TAGTGTGAGA
TACCAGAACT CGGCAGGAGA AGATTTTACA GTGAGCATAC TCAATTACTA CATTTCCAAT
ATCAAACTGA TCAGAATGGA CGGCAGCGTG TTCACGGTGC CACAGGATTC GAGCTATTTC
CTGATCCGCG AATCGAACCG CGAATCGCAG AAACTCACGA TCAGGAATGT GCTCACCGGC
GAGTATACCG GCGTGGAATT CACCATCGGC GTGGACAGCC TGCGGAGTGT CATGGACCCC
TCGCAGCCCG GACGCAAAGG CATTCTCGAC AAGGATAGCG GCCCTACCAA CGAAGAGGCC
ATGTATTGGG ACTGGAACCC AGGCTACATT TTCCTGAAAA TGGAAGGCTC GTCCGATTCG
TCGACGACCG CCAACGGGAA ATACTTCTAC CATATAGGAG GCTTCGGCGG CTTAACGGCG
CCAACGCTCA ATAACATTAA AACCGTGAAA CTGAATTTCC CCGGTCAGAA AGCCATCGTC
ACTACGAGCA TCGTATCCAA TGTACTTATT CAGGCCAATA TCCTGAAAAT ATTCGACGGT
CCGACGCAGC TGAGCATTAA GGAGAACCCC GGCGTGATGT TCACACCGTT TTCAAAAAAT
GTCGCCGACA ACTATGCAGG CATGTTTAGT GTCAAGGAAA TAAAAATCAA CTGA
 
Protein sequence
MASCQFPDEK DDTDPIETGT IQLQFDNIAG NQDLQLDSVR YQNSAGEDFT VSILNYYISN 
IKLIRMDGSV FTVPQDSSYF LIRESNRESQ KLTIRNVLTG EYTGVEFTIG VDSLRSVMDP
SQPGRKGILD KDSGPTNEEA MYWDWNPGYI FLKMEGSSDS STTANGKYFY HIGGFGGLTA
PTLNNIKTVK LNFPGQKAIV TTSIVSNVLI QANILKIFDG PTQLSIKENP GVMFTPFSKN
VADNYAGMFS VKEIKIN