Gene Dfer_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3304 
Symbol 
ID8226882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4048139 
End bp4048654 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID644931136 
Productmannose-6-phosphate isomerase type II 
Protein accessionYP_003087681 
Protein GI255037060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAT CGTTTGCGGC TGATGCCGAT AAAACTGAGG TTTTTGAAAA CGTACAGCAG 
TTTATAGATA AGCAAGGCTT TACGGTTGTC GCCAAAGATC ATTCACGTCC GTGGGGCGGC
TTTTTTGTGC TCGACGAAAG CCAGGCACCG CAGTTCATTT CCACGTTTTT CCCCCATTTG
TCGCTCGCCG ATTTTGCCGG TTACGAAAAA CTCAGTCCGA AAATCCTTGT GGTGGCGCCG
AACAAGCGCC TTTCATGGCA ATATCACCAC CGCCGCGCCG AAATCTGGAA GGTAATCGGC
GGGAACGCAG GCATCGTGAT CAGCGATACG GATGAGGAAA CCGAATTGCA GCAACTGCCG
ATCGGCACGG TTGTAAACCT GAAAAAAGGC GAGCGCCACC GCCTGGTAGG CGTTAACGAA
TGGGGCTTCG TGGCTGAAAT ATGGCAGCAC ACCGACCCTT CCAACCCGTC GGACGAAGAT
GATATCGTTC GCGTGCAGGA CGATTTCGGA AGATAG
 
Protein sequence
MIQSFAADAD KTEVFENVQQ FIDKQGFTVV AKDHSRPWGG FFVLDESQAP QFISTFFPHL 
SLADFAGYEK LSPKILVVAP NKRLSWQYHH RRAEIWKVIG GNAGIVISDT DEETELQQLP
IGTVVNLKKG ERHRLVGVNE WGFVAEIWQH TDPSNPSDED DIVRVQDDFG R