| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3238 |
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| Symbol | |
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| ID | 8226813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3971626 |
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| End bp | 3972999 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931067 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003087615 |
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| Protein GI | 255036994 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.963577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.879643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCATC TGCTCCTCGT TGAAGACGAT TCCACATTTT CAAAATTGCT CACCAATTTC
CTCGGCAAGC ATGGTCATCA GGTAAAAGCT TGTACAAGTA TCAGAGAGGC ACGGGAAACG
CTCGGTAAAG GCAGCTCCGA CGGTCCATTT GAAGTACTGA TGCTCGACTA CCGCCTGCCC
GACGGCAACT CAGTGGATTT CCTCAAAACA CTCCGGAGCG AAGGTAACCG CACACCTGCA
TTTATCATGA CGAGTTTTCA CGACGTCAGG ACGGCGGTGA CGGCCATGCA AATCGGGGCT
TTCGATTATA TCACCAAGCC GGTGAACCCG GAAGAATTGC TTATGGTACT GAGAGAGGCG
TTGAATAAGG GAGAGGTAAC GAGCGTGAAA ACCGCGCCGA AGGCGAAAAG CAACGCGCAG
TCCGGCAAGC AGTCGCTTGA CTACATTGAA GGGAAAAGCA AGGTTGCCAA GCAACTTTTT
GAATACGTGC GGCTCGTGGC CCCTACCGAC ATGTCGGTGA TCATCCAGGG CGAAAGCGGC
ACGGGAAAGG AACACGTGGC GAAGTCCATT CACCGCCTCA GCAAACGCGC CGACGGGCCG
TTTGTGGCGA TCGACTGCGG TTCGTTGTCC AAAGACCTGG CGGCGAGCGA GTTGTTCGGG
CACAAGAAAG GGGCGTTTAC CGGCGCATTG CAGGATAAAA TCGGTCAGTT CGAAGCGGCT
GATGGCGGAA CATTGTTCCT CGATGAGATC GGTAACCTCA GCTATGATGT GCAGATTAAG
CTCCTCCGCG CATTGCAGGA GCGTATTATC GTGCCTATCG GCAGCACGCA GCAGGTGAAA
GTGGACGTAC GCCTCATTGC AGCGACCAAC GAAGACCTGA TCGCCAATGC CGCTACCGGA
GATTTCCGGG AAGACCTTTA CCACCGTTTG AATGAATTCA AAATCGAAGT TCCCGCATTG
CGCAAGCGCG GCGAGGACCT GCCGATTTTC GTCCAGCATT TTGTGGATAA AGCGAATGAA
GAGCTTGAAC GAAATGTGCG GGAGCTGTCG AAGGAGGTCA TGGATGTTTT CCAGAAATAT
GACTGGCCCG GTAACTTGCG CGAGCTCAAC AACGTGATCA AGCGCCTGGT GCTGCTATCG
AAAGAAGAAG TAGCCACGCT GAGCGCATTG CCGTCGGAAA TGATTACGGC CATGGAAGAC
CAGCAAAAAC CCGCTCCCGG CTCCGATTTG AAGGCATTGC AAGAAACGCA CGAGAAAGAA
ATGATCGAAA AGGTGTTGCA GGAAGTGCGT TACAACAAAA GCAAAGCGGC CAAGTTGCTC
AACATCGACC GCAAGACTTT ATATTACAAA ATCGAGAAAT ATCATATCGA GTAG
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| Protein sequence | MAHLLLVEDD STFSKLLTNF LGKHGHQVKA CTSIREARET LGKGSSDGPF EVLMLDYRLP
DGNSVDFLKT LRSEGNRTPA FIMTSFHDVR TAVTAMQIGA FDYITKPVNP EELLMVLREA
LNKGEVTSVK TAPKAKSNAQ SGKQSLDYIE GKSKVAKQLF EYVRLVAPTD MSVIIQGESG
TGKEHVAKSI HRLSKRADGP FVAIDCGSLS KDLAASELFG HKKGAFTGAL QDKIGQFEAA
DGGTLFLDEI GNLSYDVQIK LLRALQERII VPIGSTQQVK VDVRLIAATN EDLIANAATG
DFREDLYHRL NEFKIEVPAL RKRGEDLPIF VQHFVDKANE ELERNVRELS KEVMDVFQKY
DWPGNLRELN NVIKRLVLLS KEEVATLSAL PSEMITAMED QQKPAPGSDL KALQETHEKE
MIEKVLQEVR YNKSKAAKLL NIDRKTLYYK IEKYHIE
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