| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3237 |
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| Symbol | |
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| ID | 8226812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3969074 |
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| End bp | 3971638 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931066 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_003087614 |
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| Protein GI | 255036993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.967707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTC TGCGTGGCCC GTCTTTCTTG AAATCGGTTA AAGGAAAAGT CGTTGTGGGC
TTTTTCATAG CCTCACTCGC CCTGGCAGCA TCCTGGATTA CCAGCAAAGT GGCTTTTGAT
AACATGCTCA CCACGCTGGA TACGCTCTCT ACGCCCGACG ACAAGATGCG CCTGGTGAAC
AAAATCTTCA AGGACATTCT TACACTCGAC CACCTTCAGA ACGAACGCAA GCTGAAAGGC
GAAGAGCTGA ACGACGAAGT CCTGGCGCAA TCGGTTGAGC TGATTGCCGC GCTCGACACC
CTGAGCATGC TGAGCCTCGA AGACCCGATG CAGATCATCC GGATCGATTC GATGAAGAAG
ATCCTGAAAG AACGGGAAAA AATTTATGGA GATTATGTAA AAGTACGCTC CAAGCTGGTG
AGCAACAAGG CCCTGGAAGA TGAGGTAAAA TCCATTTCCG GCCTCATCAC CACTACGAAG
GTCAAGCCGG ACAGCACGGT TGTCAAAACC GAGAAACGCA CTACTACCAC CACCGTTTAC
ACCGAAGTAC CCGACACCAG CCAGAAGGCA AGTACCAAGA AAGGCTTTTT CGGAAGGGTA
TTTGGGAATA AAAAAGTAAA ACAACCTGCG CCCGAGCCCA CCAAAATGGT TCAGAAACAG
GAAGTGAATG TGCAGGTGGA CACCATCCGC GTCGCCAAAG CCGACAGTAC GATTGAAAAA
GTGGGCGAGG CCGTGCACGC CATCGAAAAA TCACAGAAAA AACGGGCGGT AACTTTCGTG
GACCGGGAGC AGGAGCTAGC AACGGCCGGA AACTCGCTGG TGAAGCAGTT GCTGGACGTG
ATGCAGGATG TTCAGAAGGA TGTAATGGAA GACTCCAACC AGAACAACGC CCGCGCGAAA
GGAATGGTGG AAGGCAGCGT TGATCACCTC GAATGGATCA TGCTGGGCTT CTTCTTCCTG
ACAGCCGTGA TGGCCTATTT CATTTTTACG GACATTGCCA AAAGCAACGA TTACCGCCAG
CAGCTCGAAG AGGCCAAAGA GGAAGCAGAA TACCACAGCA TGGCCAAACA ACGCTTCCTC
GCCAATATGA GCCACGAGAT CCGGACGCCG CTACAATCGA TCATCGGCTA TGCGGAAGCG
CTGAAAAACG AAGAGAAACC CCGGAAGCAG GATCTCGAAA CGCTGCATTC GGCCAGCGAG
CATTTGCTAT ACCTGGTGAA CGAGGTGCTG GATTACAGCC GCATCATTTC CGACCGCTTT
ACATTCGAAG AAAGGGTGTT TTCCATTAAC CCGCTGCTGA ACGAGGTGGT GCAGGTGCTG
CGCCCCACTG CACTATCCAA AGGGCTTATC CTCCGCCTGG AAAATTCGCT CAAACCGAAC
CTGTACCTCC ACGGCGACCC GTTCCGACTG CGGCAGGTTC TGTACAACTT GCTGACAAAT
GCAATAAAAT TCACCGAAAA CGGCGAAGTA GTACTCAAAG TAACGGGCCA CGAAACTGGT
AATGCAGCAA AAATCGAGTA CCAGATCTCC GACACCGGCA TAGGGCTGTC CGCCGACCAG
GTTGAGCGTA TTTTTAACCA ATTTGAGCAG GCAGATCCGT CTATCCAGCG TAAATACGGC
GGCACGGGGC TGGGTCTCAG CATTGTAAAA GCGCTGGTAG AAGGCATGTC GGGCAATATC
CATGTCACCA GCAAGCCCGG GGAGGGCACG ACTTTTTTTG TCACCACCAG CATGAAAAAG
GCAGAAACAC TGGAATTGAC AGAGGAAGTG CAGGAACGGA GCTACCAGAT CAATGGCAAG
GTGTGGCTCG TGGACGACGA CGCGTTCATT CTCAAATGGT GCTCGTCGGT GCTCGAAATG
AACGGCATTC AGCATGCGGC ATTCTCGTCG GCTGAGGAAG TTCTGAGCCG GCCGTGGAAT
AGTGAAGTCA AATTCGTGCT CACGGATATG CGTATGTCGG GCATGAACGG CGCCGAGCTC
GTGAAGCGCC TGCGCAAATC CGCACCGGCC GACGTCAAGT TCTTCGTGCT CACCGCTCAG
GCATTGCCCG AGGAACGCAA GAAGCTTCTG GGTATGGGCT TCGACGGATA CCTCATGAAG
CCATTCCATT CCAGGGACCT GCTGGAACTG CTCGAATCGT CATCTACGCC GGAAATACCG
GAAGCTGGAA TACTTTCACC AATATTAGCG GAAACAGAGC TCGATAGCGC TTCGCATAAC
CTCGACTTTG ATTTCTCGAT GCTTACCGAA ATGACATTCG GCGACGAAAG CCTGCTGCGC
GAAATACTCG ACCAGTTTGT GAAAGATTCG CGGGCGGATA TCGATTCGCT CAGGCGTCAT
ATTGCCGCCA ACGAACCTGA CCACACGCAG GAGCTCATGC ACCGCATGGC CGGGCGTACA
GGGCAAATCG GCGCGCGCGA TCTGTCGGCG CGGTTCCGTA ACCTCGAAAT TGCATTGCGT
GAAAATCCTT CGGAAGTATC GGAAAAAGAA ATGACGCAGG TCGTAAACGA CGCTGCGTCA
GTGATTGAGC AAGTGGAGGA AAAAGCGCTC TCCTACTCGA TATGA
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| Protein sequence | MFTLRGPSFL KSVKGKVVVG FFIASLALAA SWITSKVAFD NMLTTLDTLS TPDDKMRLVN
KIFKDILTLD HLQNERKLKG EELNDEVLAQ SVELIAALDT LSMLSLEDPM QIIRIDSMKK
ILKEREKIYG DYVKVRSKLV SNKALEDEVK SISGLITTTK VKPDSTVVKT EKRTTTTTVY
TEVPDTSQKA STKKGFFGRV FGNKKVKQPA PEPTKMVQKQ EVNVQVDTIR VAKADSTIEK
VGEAVHAIEK SQKKRAVTFV DREQELATAG NSLVKQLLDV MQDVQKDVME DSNQNNARAK
GMVEGSVDHL EWIMLGFFFL TAVMAYFIFT DIAKSNDYRQ QLEEAKEEAE YHSMAKQRFL
ANMSHEIRTP LQSIIGYAEA LKNEEKPRKQ DLETLHSASE HLLYLVNEVL DYSRIISDRF
TFEERVFSIN PLLNEVVQVL RPTALSKGLI LRLENSLKPN LYLHGDPFRL RQVLYNLLTN
AIKFTENGEV VLKVTGHETG NAAKIEYQIS DTGIGLSADQ VERIFNQFEQ ADPSIQRKYG
GTGLGLSIVK ALVEGMSGNI HVTSKPGEGT TFFVTTSMKK AETLELTEEV QERSYQINGK
VWLVDDDAFI LKWCSSVLEM NGIQHAAFSS AEEVLSRPWN SEVKFVLTDM RMSGMNGAEL
VKRLRKSAPA DVKFFVLTAQ ALPEERKKLL GMGFDGYLMK PFHSRDLLEL LESSSTPEIP
EAGILSPILA ETELDSASHN LDFDFSMLTE MTFGDESLLR EILDQFVKDS RADIDSLRRH
IAANEPDHTQ ELMHRMAGRT GQIGARDLSA RFRNLEIALR ENPSEVSEKE MTQVVNDAAS
VIEQVEEKAL SYSI
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