| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3228 |
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| Symbol | |
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| ID | 8226803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3956329 |
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| End bp | 3957978 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931057 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_003087605 |
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| Protein GI | 255036984 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC AAACTTTCAC ACTCCCTTAC CAGCATCCTT TCACCGCGGA CAAGAAATTG
CAAAAATCAG TTGCCTATTT TTCCATGGAG TTCGCCGTAG ATCAGGCATT GAAGATCTAC
TCCGGCGGCC TCGGCTTCCT CGCAGGTTCG CACATGCGCA GCGTGTACGC GCTCAATCAG
AACCTGATCG GGATTGGAAT GCTCTGGAAA TATGGCTATT ACGACCAAGG ACGTAAAAAG
GACGGCAGCA TGCAGCCCGA GTTCCGCGAG AAAATGTACT CGTTCCTGGT CGATACACGC
ATCCGGTTTC AGATTCCCAT GATGGGCAAA AACGTATGGG TAGCAGCCTA TTACCTCGAT
CCCGAAACCT TCGGATCGGC GCCGATGTTC CTGCTCACCA CCGATACCGA CGGCAATGAC
GAATCGACCC GGGCGATCAG CTATTCATTG TATGACGCCG ACGTGAAGTA CAAAGTGGCG
CAATGCATGG TGCTGGGCAT CGGCGGAGCG CGTTTGCTCG AAGCATTGCA ATACGAGCCG
GAAGTCTACC ATCTGAACGA AGCGCATGCG GTATCGGCCG TTTATCATTT GTACAAAAAA
TACAAAAGCG CTGCCGAGGT ACAGAAGCGG GTCGTTTTCA CGACCCACAC GCCCGAAGAG
GCCGGTAATG AAAAGCACGA CATTCATTTC CTTGACAAAC TGGGCTTCTT TTCGGGCGTC
GACCTGGAGA CGGTGCGGAA GATCAGCGGC ATTCGCGACG GCGTTTTTAA CCACTCGCTG
GCGGCGTTGA GTCTGAGCCG CAAGGCCAAT GGCGTATCGA AATTGCACGG CGAAGTGTCC
CGCAAGATGT GGAAGGCACA TCCCAAAATA GCGCCGATCG GCCACATTAC CAATGCCCAG
AACAAGGCCT ACTGGGTAGA TCCCATTCTG GAAAAGGCGC GGATCGCTAA CGATGTGGAG
GCGATTGTGG CGCGGAAAAA GGAATTGAAG AAAGTGCTCT TCAAAACCGT TGCCGACCAG
AGCGGAAAAC TGTTTGATCC CGATGTGCTG ACGATCGTGT GGGCGCGCCG GTTTGCGGCT
TACAAACGTC CGGACATGCT CGTTTGGGAC GTCGAACGTT TCAAGCGGAT GATGGCCAAT
ACCGATCAGC CGGTGCAGGT GATCTGGGCC GGAAAGCCTT ATCCGAAAGA CGAGGGCGCG
GTTGGGACGT TCAACCATCT GTTCTACATG AGTCACCTGT TCCCGAACAT GGCCGTGCTG
ACGGGCTACG AACTGGCGCT TTCGAAATTG CTGAAAGACG GGGCGGATAT CTGGCTGAAC
ACGCCGGTCG TGACCCGCGA GGCTTCCGGC ACCAGCGGTA TGACGGCCGC CATGAACGCC
GCGCTGAACT TTTCGACATT CGACGGCTGG ATCTGTGAAT TCGCGAAGGA CGAGCACAAT
GCATTCCTGC TACCGGTGGC GAAAGGGGAC GATATCAACA AGCAGGACTG CGACAATCTC
ATGGAAACGC TCGAACGCAG CGTAATCCCG ACCTACTACA ACGCCCCGCA GAAATGGCAG
CAAATGATTT TAAATAGTAT GAACGAAGTA AGCGAGCCAT TCAACTCGGA TCGCATGGCG
CGGGAGTATT ATGAGTTGTT GTACAGTTAA
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| Protein sequence | MSQQTFTLPY QHPFTADKKL QKSVAYFSME FAVDQALKIY SGGLGFLAGS HMRSVYALNQ
NLIGIGMLWK YGYYDQGRKK DGSMQPEFRE KMYSFLVDTR IRFQIPMMGK NVWVAAYYLD
PETFGSAPMF LLTTDTDGND ESTRAISYSL YDADVKYKVA QCMVLGIGGA RLLEALQYEP
EVYHLNEAHA VSAVYHLYKK YKSAAEVQKR VVFTTHTPEE AGNEKHDIHF LDKLGFFSGV
DLETVRKISG IRDGVFNHSL AALSLSRKAN GVSKLHGEVS RKMWKAHPKI APIGHITNAQ
NKAYWVDPIL EKARIANDVE AIVARKKELK KVLFKTVADQ SGKLFDPDVL TIVWARRFAA
YKRPDMLVWD VERFKRMMAN TDQPVQVIWA GKPYPKDEGA VGTFNHLFYM SHLFPNMAVL
TGYELALSKL LKDGADIWLN TPVVTREASG TSGMTAAMNA ALNFSTFDGW ICEFAKDEHN
AFLLPVAKGD DINKQDCDNL METLERSVIP TYYNAPQKWQ QMILNSMNEV SEPFNSDRMA
REYYELLYS
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