| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3217 |
|---|
| Symbol | |
|---|
| ID | 8226792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3943276 |
|---|
| End bp | 3944640 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644931046 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003087594 |
|---|
| Protein GI | 255036973 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4287] PhoPQ-activated pathogenicity-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.802811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGT TTTTGAAAAT AAAAATCAGG TTTGCTTTAT CGATGCTGGT GGTGTTCCTG
GCGTCGGGCT TCATCAATGC ACAAAAAATC ACCCCTGAGA ATGCATTGGA AAGTTACCTT
AACAATGGTG ACAAGACATT TAAATGGGAG TTGAAAGAAT CATTTAAGCG CGAAAATCTT
ACTTTTTACC AGGTATTGCT GACTTCGCAA AAATGGCGCG AATTCACCTG GACACACCAG
TTGACGATCA TCGTCCCGGC TGAGAACCAT CACGACGACG CTCTGATGTT CATCACCGGC
GGCTCCAATA CCGACGGACG ACCCAATTGG AACAGCAAAA AAGACGAAAA AATGTACGCG
TCGCTGGGAG CCGTCGCGAC AACGAACCAG GCCATTGTAG CGCTGCTGAA ACAAACGCCT
AACCAGCCGT TTTTCGGCGA TCTTACCGAA GATGCACTCA TTTCCTACAC ATTACACAAC
TTCAAAAAAG ACAAGGATTA CACCTGGCCG CTGCTGTTTC CGATGGTAAA AAGTGCGGTA
AAGGCCATGG ATGCCGTGCA GCAGTTTTCC CAAAAGCAAT TGAAACACAC CGTGAACAGT
TTTGTGGTGA CTGGCGCTTC CAAACGCGGC TGGACGACAT GGCTCACCGG CGCAAGCGAC
AAGCGCGTGC AGGCGATTGC GCCGATGGTG ATAGATGTGC TGAATATGCC GGTAAGTCTT
GATTATCAGA TCAAATCGTG GGGTGATTAC AGCATCCAGA TCGAAGATTA CGTAAAACTC
GGCATTCCGC AATCGACCGG CTCGCCCGAA GGCCAGGCCA TCACGACGAT GATCGACCCG
TATTCGTACC GCGCAAAACT GACCATGCCC AAAATGATAT TCATGGGCAC GAACGACGAG
TATTGGGTGG TGGATAATAT CAAAAACTAC CTCGACAAGA TTCCCGGCAC TAATATGCTA
CATTATGTGC CCAATGCAGG CCACGACCTC GGCGACGGCA AGCAGGCAAT GGAAGCCCTG
AGCGCATTCT TCGGCGCGAC GATCAACAAA CGGCCTTACA CCGAATGCAA ATGGAGCCAG
CAGCTCGCAG GCAGAAATGT GAATCTGGAC ATCAAGGCCA CTTCCGACGC ATTGGTGGAC
GTGATCCTAT GGTCGGCGAG CTCGCCGGAC CAGGATCTGC GGAATGATAC ATGGACGGCC
AAGAGTTTGA AAATCAGTAA TAAATCGACC GTGAAGGTGA CCGCGGAACT GCCTGCCAGC
GGGTTCCGCG CATTTTACGT GGATTTGAAA TACAAAACAC CGAAAGGCGA CTTATACACC
GAAAGCACGC GGGTGTTTTT GACGGATAAT AAGTCGGTTC TGTGA
|
|---|
| Protein sequence | MMMFLKIKIR FALSMLVVFL ASGFINAQKI TPENALESYL NNGDKTFKWE LKESFKRENL
TFYQVLLTSQ KWREFTWTHQ LTIIVPAENH HDDALMFITG GSNTDGRPNW NSKKDEKMYA
SLGAVATTNQ AIVALLKQTP NQPFFGDLTE DALISYTLHN FKKDKDYTWP LLFPMVKSAV
KAMDAVQQFS QKQLKHTVNS FVVTGASKRG WTTWLTGASD KRVQAIAPMV IDVLNMPVSL
DYQIKSWGDY SIQIEDYVKL GIPQSTGSPE GQAITTMIDP YSYRAKLTMP KMIFMGTNDE
YWVVDNIKNY LDKIPGTNML HYVPNAGHDL GDGKQAMEAL SAFFGATINK RPYTECKWSQ
QLAGRNVNLD IKATSDALVD VILWSASSPD QDLRNDTWTA KSLKISNKST VKVTAELPAS
GFRAFYVDLK YKTPKGDLYT ESTRVFLTDN KSVL
|
|---|
| |