| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3196 |
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| Symbol | |
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| ID | 8226771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3914600 |
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| End bp | 3917035 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931026 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003087574 |
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| Protein GI | 255036953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGTA ATATCGGGTA TTTACTGGCC ATTTGTATTT TCCTGGGGAG CTGCTCGGTA
AATCGATACG TGCCCGAAGG CCAGAGCATT TATGTCGGTA ACAAAGTAAA TGTGCAGGCC
GACACGCTGT CGAAGCCTAA TGTGTCCGGC TTGTCGTCCC AGCTCGAAGG GCTGATCAAG
CCGCCGCCCA ACAAAACCCT TTTCGGGTTT CCGTGGAAAG TTTGGTTTTA TTATTGGATA
GGCGAACCCA AAGACGAGGG CGGTTTGCGG AGCTGGTTCA GGAAAAAACT GGGCGAACCG
CCGCGCTATG CAACGCAACG CATTGTGGAC ATTAATGCCG CCAATATGGT AGCTTACCTG
GATAATGAAG GCTATTACCG GTCGTCGGTG AAGGGTAAAA TCGTGCCTCA TAAAAAGAAG
AAAAAGCGCA CGGCGGTTAC GGAGTACAAT GCGTATGTCA TGCCGCGCTA CGTGATCAAC
GAGCTCACGT ACGTCATTCC CGACAGTTCG CGCTTCAACC GCGACCTCGA TTCGGCCAAG
GCAAAAACCC TTCTGAAAAA AGGCGACCCT ATCCGGCTCG ATGTGGTCAG CGCCGAACGC
ACGCGCATTG ATCAGGAACT GAAAGGCAAA GGATACTATT TTTTCAACCC GGATCATCTG
ATCGTCAAGG TCGATTCCAC GATTGGCGGC GCCGATTCAA CGCTCGGGCC GCAGCAGGTT
AATTTATACC TGGAAGTCAA AAAAGAAACT GCGCAAACTT CGCTGAAACA GTATTTCATC
AACCGCATTT TCGTCAATAC CGGCACGGAG GAAAGCCAGC AAACCGATTC TACCGCCCTT
GCCACGCGCG GTCCATTGCG GAGAGGGATC AACGTCACCG ACCCCGGCAA CAAGTACAAA
CGCCGGATAT TCTACGACGC GATCGGGTTC AGAAGGGGTA ATATGTATAC CAATACCATG
CACGACGTGT CGCTGCAACG GTTGGTAAAC CTGCAAAATT TCCGTTTTGT CAAAAACCGC
TTCGACCTCG TTCCCCGCTC CGATTCGGCA TTGCTGGACG TGTATTACGA CCTCGCGCCG
ATGAAGAAAA AGTCGCTGCA AACCGTCCTT TCGGCCAGTA CCAAATCCAA CAACCTCGGC
GGCTCGCAGC TGGATGTTAC CTGGCGAAAC CGTAACTTCT TCCGCGGGGC CGAAATGCTC
GCGCTCAGCG CCTATTTCGG TTTTGACGTG CAGCTGGGAG GAAACCGTAA CTCATCGAAC
AACATCGGAA ACGAGTACAT CCGTTACGGG GCAAAGGCCG ATCTTTCTTT CCCGCGCTTT
ATTATCCCAT TCGTGCGGAT CAGGCCGGAA AAGAGCCAGG CATTGCCCAA AACGATCCTA
TCGCTCAATT ACGAAAACCG CATCCAGCGC AATTTCTACA CCACCCGCTC CATCCGCGGC
GACTGGTCGT ACGTGTGGCG GCGTAATTCC GAAGTCGAGC ATACCCTCAC GCCCATTTCA
ATCAACTTTG TGGAGCCGAG GAATATCAAT TACGAAACCT ACGACAAGAT CATCTTCGAC
CCGGACACGA ACCCGCTGGA CGTACAGCGT TACCTGACGA TCCTCGAAAC GAAGTACCTC
ATCATGGGTT CTAACTATTC GATCTCTTTC CGGCCTACGC CGCGCCCATT CAGCAAAAAC
CAGTTTGCAT TAAGCGGCGG TATCGATTAC GGCGGGAATT TGTTGAGCCT TATTGCCAAA
AAGATGGAGT ACGACAGCAT TCCAAGAGAG CTTTTCGGGG TGCCGGTGTT TCAATATATC
AAGTTGGATG GTGATGTAAG ATACTACCGC ACGATCACGC CGTCGATCAA ATGGGCTAAT
CGCCTTTTGC TGGGTGCAAT CAGGCCGTAT GGTAATTCCA AAACGATGCA GACGCCGCTG
TTCAAGCAAT ATTTCGGCGG TGGTAGCACG GGTATCAGGG CCTTCCGGGC AAGATCACTC
GGGCCGGGCG TTTATCCGCC GGATTCAAGC TCTATCGCGC TGTTCGGCTA CCAGACTTTT
GCCGACATCC GTATGGAATT CAACTCGGAA ATACGCATTA AGTTTACCGA CATTATCAAC
ACAGCGCTGT TTGTAGATGC CGGCAATATC TGGTCGTTCG GTAGTGCGGA GCGGTCGGGT
TACGACGAGC GGGCGCTTAT CAGCAATGAC TTTTTCAAAC AGCTCGCCGT AGGCGGCGGG
ATAGGCCTTC GTCTGGACTT CTCCTACCTG GTTTTCCGCC TCGACCTCGC CACGCCTTTC
CGCAAGCCGT GGTACACGCA GGAAATTGAA TCAGAAACAC CCGAGGGTGA TATCAAATAC
AAAAACCCGT GGGTTTTCAA TGAGATCAAA TTCGGAAGTA AAAGTTGGAG AAAGGAGAAC
CTGATCTTGA ACATCGCGGT GGGGCTGCCA TTCTAG
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| Protein sequence | MRSNIGYLLA ICIFLGSCSV NRYVPEGQSI YVGNKVNVQA DTLSKPNVSG LSSQLEGLIK
PPPNKTLFGF PWKVWFYYWI GEPKDEGGLR SWFRKKLGEP PRYATQRIVD INAANMVAYL
DNEGYYRSSV KGKIVPHKKK KKRTAVTEYN AYVMPRYVIN ELTYVIPDSS RFNRDLDSAK
AKTLLKKGDP IRLDVVSAER TRIDQELKGK GYYFFNPDHL IVKVDSTIGG ADSTLGPQQV
NLYLEVKKET AQTSLKQYFI NRIFVNTGTE ESQQTDSTAL ATRGPLRRGI NVTDPGNKYK
RRIFYDAIGF RRGNMYTNTM HDVSLQRLVN LQNFRFVKNR FDLVPRSDSA LLDVYYDLAP
MKKKSLQTVL SASTKSNNLG GSQLDVTWRN RNFFRGAEML ALSAYFGFDV QLGGNRNSSN
NIGNEYIRYG AKADLSFPRF IIPFVRIRPE KSQALPKTIL SLNYENRIQR NFYTTRSIRG
DWSYVWRRNS EVEHTLTPIS INFVEPRNIN YETYDKIIFD PDTNPLDVQR YLTILETKYL
IMGSNYSISF RPTPRPFSKN QFALSGGIDY GGNLLSLIAK KMEYDSIPRE LFGVPVFQYI
KLDGDVRYYR TITPSIKWAN RLLLGAIRPY GNSKTMQTPL FKQYFGGGST GIRAFRARSL
GPGVYPPDSS SIALFGYQTF ADIRMEFNSE IRIKFTDIIN TALFVDAGNI WSFGSAERSG
YDERALISND FFKQLAVGGG IGLRLDFSYL VFRLDLATPF RKPWYTQEIE SETPEGDIKY
KNPWVFNEIK FGSKSWRKEN LILNIAVGLP F
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