Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3178 |
Symbol | |
ID | 8226753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3887894 |
End bp | 3888463 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644931008 |
Product | protein of unknown function DUF1234 |
Protein accession | YP_003087556 |
Protein GI | 255036935 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC GCTTTCTGAC CGTACCCGGC CTTGCGAGCT CCGGCCCGCA GCACTGGCAA ACCATCTGGG AAGAGCAATA TCCCGACCGT TTCGACCGCG TGCGGCAGGC CAACTGGGAC TGGCCCGTTA AGGAGGATTG GGTGGGGCAG CTGCAAAAGC AGATCAGCGA ACTCACCGGA CCGACGATCC TCGTGGCGCA CAGCCTGGGT TGCATTACCG TGGCGCATTG GGCGCAGGAA TTCAGTTCGG AGCACATTAA GGGCGCATTA CTGGTGGCGC CGGCAGATGC GGAGCTCTCC AAACGCCTGA ATTTTGTGGT CGGTTTTACG CCTATCCCGG TGCGCGCTAT CCCGTTTAAA ACGATTGTGG TGGCGAGTAC GAACGACATT TACGCAACCA TTACCCGGTC GAAAGTATTC GCGGCGAATT GGGGCAGCGA TTTTATCAAT ATTGGCAAAA AAGGCCATAT CAATGCAGTT TCAGGGCTGG AAGATTGGAC AGAGGGCAAG AAGATTTTGG AACATTTTGA AAGCGTGAAA TTGCTCGAAA GCGAGGCAAC GCGCTCCTGA
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Protein sequence | MSMRFLTVPG LASSGPQHWQ TIWEEQYPDR FDRVRQANWD WPVKEDWVGQ LQKQISELTG PTILVAHSLG CITVAHWAQE FSSEHIKGAL LVAPADAELS KRLNFVVGFT PIPVRAIPFK TIVVASTNDI YATITRSKVF AANWGSDFIN IGKKGHINAV SGLEDWTEGK KILEHFESVK LLESEATRS
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