Gene Dfer_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3178 
Symbol 
ID8226753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3887894 
End bp3888463 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID644931008 
Productprotein of unknown function DUF1234 
Protein accessionYP_003087556 
Protein GI255036935 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGC GCTTTCTGAC CGTACCCGGC CTTGCGAGCT CCGGCCCGCA GCACTGGCAA 
ACCATCTGGG AAGAGCAATA TCCCGACCGT TTCGACCGCG TGCGGCAGGC CAACTGGGAC
TGGCCCGTTA AGGAGGATTG GGTGGGGCAG CTGCAAAAGC AGATCAGCGA ACTCACCGGA
CCGACGATCC TCGTGGCGCA CAGCCTGGGT TGCATTACCG TGGCGCATTG GGCGCAGGAA
TTCAGTTCGG AGCACATTAA GGGCGCATTA CTGGTGGCGC CGGCAGATGC GGAGCTCTCC
AAACGCCTGA ATTTTGTGGT CGGTTTTACG CCTATCCCGG TGCGCGCTAT CCCGTTTAAA
ACGATTGTGG TGGCGAGTAC GAACGACATT TACGCAACCA TTACCCGGTC GAAAGTATTC
GCGGCGAATT GGGGCAGCGA TTTTATCAAT ATTGGCAAAA AAGGCCATAT CAATGCAGTT
TCAGGGCTGG AAGATTGGAC AGAGGGCAAG AAGATTTTGG AACATTTTGA AAGCGTGAAA
TTGCTCGAAA GCGAGGCAAC GCGCTCCTGA
 
Protein sequence
MSMRFLTVPG LASSGPQHWQ TIWEEQYPDR FDRVRQANWD WPVKEDWVGQ LQKQISELTG 
PTILVAHSLG CITVAHWAQE FSSEHIKGAL LVAPADAELS KRLNFVVGFT PIPVRAIPFK
TIVVASTNDI YATITRSKVF AANWGSDFIN IGKKGHINAV SGLEDWTEGK KILEHFESVK
LLESEATRS