Gene Dfer_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3113 
Symbol 
ID8226687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3802319 
End bp3803716 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content58% 
IMG OID644930944 
Producthypothetical protein 
Protein accessionYP_003087493 
Protein GI255036872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.91876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTCA ACAAACTTCT TATCACGACG GCCGCCGGAA TGGCGGCCGT CGCTACGGCG 
GGTGCCGTTC TCCCTGCATT CGCGCAGCAC GAACACCACC AGAAGCCTGC GAAAGACACT
GTCAGCCATG AAAACCATGA CATGAAAAGC ATGGATCATG CCCAAATGGA CCATTCGGGC
AAGCCGCACA TGACCCACAG CTTTTCGCTC AGCCTGCCCA TGACCCGCAA TGGCTCGGGT
ACGGGCTGGC AGCCGGACGC CACACCCATG TACGCCTACA TGAAGCACGG CAGCAAATGG
AACTACATGC TCCACGGCAG CATTTTCCTC CGCTATACCG CCCAAAACTT CAATAATGAC
GGCAAAAAAG GCTCCGATTC GAAGTTCAGC GTGCCCAACT GGTTTATGGG AATGGCCCAG
CGGCAGGTCG GCAAAAATGG CTTGCTAAAC CTCCGCGCCA TGGTTTCCCT CGACCGCATT
TTCGACGGAG GCGCGGGTTA TCCGCTGCTA TTTCAATCCG GCGAGAGCTG GAAAGGCCGG
CCGCTTATCG ACCGGCAGCA CCCCCACGAC CTGTTTTCGG AGCTGTCCAT CGGCTACACC
CAACGCATTA GCGACAAGGT CGACCTGACG ATCTACGCGG GCTACCCCGG CGAGCCGGCA
CTGGGGCCGA CGGCATTTAT GCACCGGATG TCGGCATTCA ACAACCCCGA CGCCGTGCTC
GGTCACCATT GGCAGGACGC CACCCACATT ACATTCGGCG TGGTCACGGC GGGCATCCGC
TACGGGAAGT TCAAACTGGA AGGTTCCTCA TTCACCGGCC GCGAGCCCGA CGAGAACCGC
TTCGATTTCG ACAAGCCGCG CTTCAATTCT TACAGCTACC GGCTGCTCTT TAACCCGTCG
GCCAACTGGG CATTGCAGGC GTCGCGCGGA TTTATCAAAA GCCCCGAGCC CCGCGAACCC
GATGAAGACG TGAACCGCAC GACGGCTTCC GTGCAGCATT CGGGTAATCT GGGTGGCAAA
AACAGGTGGA TATCCTCCAC GGTCGTTTGG GGCCTGAACG ACGCCGGTGC GCACCATAAG
GAGCATTCTT TACTCGCCGA ATCCAATGTA CAACTGGATA AATGGGCAGT TTACGGACGT
TATGAATGGG TGCAAAAAAG CGTTGGCGAA CTCGGGTTGG AAACAACTCT GGGTGAGCTG
GGATTTGAAA CACTGCCCGT TTCAATGTAT TCGGTGGGTG TGAACCGGCA GATCGCCTCG
TTCGGCAACA CGCTTTTGCA GGCGGGCGGG CAGCTGAGTT TGTACAAACC CGACCGTCCG
CTGGAAGCCG CATATGGCAA AACACCACTT TCAGGACAAG TTTACCTGCG CATTACCCCC
GGGCTCATGC GTATGTAA
 
Protein sequence
MLLNKLLITT AAGMAAVATA GAVLPAFAQH EHHQKPAKDT VSHENHDMKS MDHAQMDHSG 
KPHMTHSFSL SLPMTRNGSG TGWQPDATPM YAYMKHGSKW NYMLHGSIFL RYTAQNFNND
GKKGSDSKFS VPNWFMGMAQ RQVGKNGLLN LRAMVSLDRI FDGGAGYPLL FQSGESWKGR
PLIDRQHPHD LFSELSIGYT QRISDKVDLT IYAGYPGEPA LGPTAFMHRM SAFNNPDAVL
GHHWQDATHI TFGVVTAGIR YGKFKLEGSS FTGREPDENR FDFDKPRFNS YSYRLLFNPS
ANWALQASRG FIKSPEPREP DEDVNRTTAS VQHSGNLGGK NRWISSTVVW GLNDAGAHHK
EHSLLAESNV QLDKWAVYGR YEWVQKSVGE LGLETTLGEL GFETLPVSMY SVGVNRQIAS
FGNTLLQAGG QLSLYKPDRP LEAAYGKTPL SGQVYLRITP GLMRM