Gene Dfer_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3062 
Symbol 
ID8226636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3743609 
End bp3744610 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content54% 
IMG OID644930893 
Productesterase/lipase-like protein 
Protein accessionYP_003087442 
Protein GI255036821 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.851787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.36043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTA CCGCCGAATT GAGGGTATAT TGGTTCAAAA GGCGTCTTTT CGAGGAAAAG 
CAAGCCTATT CAATGAAAAA AACTGTACAT ATCCTCGCTA TTTTGAGCCT GTTCGCATTA
TCCAGCCCAT CCATGGCACA AACGGAAACC ATCAACCTTT GGCCGGAAGG CAAAGTCCCT
AATTCCAAGC AGAGCGACAT CGCCGAGAAG TCGGACACCG ACGCCCAGGG CATTCTCCGG
ATCAGCGGCG TAACCGTGCC AACCATCACC GCCTACCCCG CACCGAAAGA CAAAGCAACC
GGCGCAGCTG TGATGATCTG CCCCGGCGGC GGCTACGGCA TCCTGGCCGC ATCCCACGAA
GGCAGCGATT TTGCCAAATG GTTCAACGAG CGCGGCATCT CGGCATTTGT ACTGAAATAC
CGGCTACCCA ACGAAAAAGC CATGACGCAC CAGCACGAAG TGCCCCTGAT GGACGCAATG
CAGGGCATGA AACTGATCCG CCAGAATGCC GAGAAGTGGA ACATAGATAC GGACAAGATC
GGCGTGATGG GATTTTCAGC CGGCGGGCAC CTCGCAGCCA CGCTGTCAAC ACACCATAAT
ATGGGTGCAA AAGCTTCCGC GGAAGGCAAA CCCAACTTTT CGATTTTGAT TTACCCGGTG
ATCTCCTTCC TGCCCGCGAT CTCGCACGGC GGCTCGCGTG ACAACCTCCT CGGCCCGGAA
AAATCCGAAG AGCTGATCCG CTATTATTCC AACGAATTGC AGGTATCCGA ACAAACGCCG
CCGGCATTCC TCGTGCACGC CATGGACGAT ACGGGCGTGC CGGTCGAAAA CAGCATCGAA
TATTACCTCG CACTCAAAAA GAAGAAAATC CCTGCCGAAA TGCATTTGTA TCCCAAAGGC
GGCCACGGGT ATGGAATGCG CACGGAAGGC AAAGGATCAC TGGCCAATTG GCCTGAGGCA
ATGGAAGGTT GGCTTTATTC AGCGGGCTAT ATGAAAAAAT AA
 
Protein sequence
MPVTAELRVY WFKRRLFEEK QAYSMKKTVH ILAILSLFAL SSPSMAQTET INLWPEGKVP 
NSKQSDIAEK SDTDAQGILR ISGVTVPTIT AYPAPKDKAT GAAVMICPGG GYGILAASHE
GSDFAKWFNE RGISAFVLKY RLPNEKAMTH QHEVPLMDAM QGMKLIRQNA EKWNIDTDKI
GVMGFSAGGH LAATLSTHHN MGAKASAEGK PNFSILIYPV ISFLPAISHG GSRDNLLGPE
KSEELIRYYS NELQVSEQTP PAFLVHAMDD TGVPVENSIE YYLALKKKKI PAEMHLYPKG
GHGYGMRTEG KGSLANWPEA MEGWLYSAGY MKK