Gene Dfer_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3035 
Symbol 
ID8226609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3711190 
End bp3711723 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content50% 
IMG OID644930866 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003087415 
Protein GI255036794 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.896481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACACAT TATATCGTAC ACTAGCGGGT TGCAAACGGC AGGAGCGCCA GAGTCAGGAA 
AAATTGTACC GGCAATTTTA CCCTGTCCTG TTCGCACTTT GCAAGAACTT TTTCGAGGAC
AAGCACGATA TCGTCACCGC AATCAACAAC GGTATGCTGA AAGTGTTTAC GAACATTCAC
CAATACGATG AATCCAAAGG CGAATTCTTC AACTGGATGT ACACGACGGT CCGCAATGCC
GCACTTACCA TGCTTCGTGA CCGGAAAAGA CAATCGGTTG ATTATGTAGA AATTACCGAA
GAAATGGAGC TCCCGTCGGC CGAAAACCCG TTTGAACAGT TGTCGGGCAA CGACATTCAG
CAATACCTGA TGCAGCTGCC GGCCGCAACC CGTCGCATTT GCAGCCTGTT CTACATCGAC
GGGTTTTCAG TCAAGGAAAT CGCCGCCGCG CTGGCGATCA GCGAAGGCAC CGTCAAATGG
CATTTGAGCG AAAGCAGGAC CCGGTTGAAA GTGATTTTTG AAAACCTCCT CTGA
 
Protein sequence
MDTLYRTLAG CKRQERQSQE KLYRQFYPVL FALCKNFFED KHDIVTAINN GMLKVFTNIH 
QYDESKGEFF NWMYTTVRNA ALTMLRDRKR QSVDYVEITE EMELPSAENP FEQLSGNDIQ
QYLMQLPAAT RRICSLFYID GFSVKEIAAA LAISEGTVKW HLSESRTRLK VIFENLL