Gene Dfer_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3019 
Symbol 
ID8226593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3692138 
End bp3693040 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content51% 
IMG OID644930850 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_003087399 
Protein GI255036778 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000114003 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.743333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA GGTTCTCTTC CAATGGCCGT TCACTGGCCT CTTTTGCTAT TCAGTTGACA 
TCCCGCGTTA CCGATTGGGT ACTGCTTTGG GGCTTTAAAA GCCTTTCTGT TATCATCTAT
TTCGTCCTAC GCTATGTGCT TCGTTACCGT AGGGCATTAA TCCATCAGAA TCTCACCAAT
TCCCTTGTCG GCAAGCCCGA GACCGAAATC GATAAGCTGG TAGAGGCATA TTACCGGCAC
ATTGGTGATC TGGTGGTTGA ACCGTTTCTG TTTCGGCTGG CTCCCGCACG CCTCCGCAAG
CGCCTGGCTT CCTACACCGA TCTCGGGGTC CTGGAACGTT CGCTCAATAA TGATAAGCAG
GTGATCGTGT TTGCATCTCA TTACGGAAAC TGGGAATACC TGGTAAACCT GCCGGAAGTG
ATCGAGTACC CGGTTTACAC CGCCTATTCG CCCATCAAAA TCGAGTGGGT CAACCGACTG
ATGATCAACA TCCGGTCTGT TTTCGGGGTA AACCTGATTG CCAAGCAGGC ATTCTATCGC
CAGGCAATGA TGCTCCTCCG AAAGCAATCG CTTCCAAAAC TACTCGTGGT AATCGGCGAC
CAGCGGCCTG CGCCGGGCAG TCAGAAGTTT CATCTTCCCT TTTTGGATCA AAAAACGGCT
GTTCAAACCG GCGGCGAGCG AATTGCGGCT TTGTCCGAGG CTACACTTGT ATATGTACAC
TCGCAGAAAA AGGCCCAATT CAGCTACGAA TTCACTTTTA CGGAGATGAA AAACGTCGAC
AGGCACACCC CGATGGACGT TACCAGTGCC TACTACCACA TTTTGGAACA GAGTATTTTC
CGCTCCCCGG CGTATTGGCT CTGGTCGCAT AACCGGTGGA AGGTCGCAGC CGCGCCAAAC
TGA
 
Protein sequence
MKSRFSSNGR SLASFAIQLT SRVTDWVLLW GFKSLSVIIY FVLRYVLRYR RALIHQNLTN 
SLVGKPETEI DKLVEAYYRH IGDLVVEPFL FRLAPARLRK RLASYTDLGV LERSLNNDKQ
VIVFASHYGN WEYLVNLPEV IEYPVYTAYS PIKIEWVNRL MINIRSVFGV NLIAKQAFYR
QAMMLLRKQS LPKLLVVIGD QRPAPGSQKF HLPFLDQKTA VQTGGERIAA LSEATLVYVH
SQKKAQFSYE FTFTEMKNVD RHTPMDVTSA YYHILEQSIF RSPAYWLWSH NRWKVAAAPN