Gene Dfer_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2998 
Symbol 
ID8226571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3663224 
End bp3663946 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID644930828 
Producturidylate kinase 
Protein accessionYP_003087378 
Protein GI255036757 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02075] uridylate kinase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC CAAAATACAA ACGTTTATTA CTGAAACTCA GCGGAGAAGC ACTCAACGGG 
GGCGATAAGG CCCAGGTCAT TGACTTTAAC ATTCTCGACA ATTATGCCAA GGAAATCAAA
AGGATTACCG AGGTAGGCGT ACAGGTGGCA ATTGTAATTG GTGGTGGAAA CATATTCCGC
GGGGCTTCCG TGGAAAAATC GGGGATCGAC CGCGTGCAGG GCGACCATAT GGGCATGCTC
GCGACCGTGA TCAACGGCAT GGCGATCCAG AGTTCACTTG AAAAACACGG AATGAACACG
CGCCTGATGT CGGCGATCAA AATGGAGCAG GTTTGCGAGC CATTGATCCG CCGCCGCGCT
ATCCGCCACC TCGAAAAAGG ACGTGTGGTG ATCTTCGGTG CAGGCACCGG CAACCCCTAC
TTCACAACCG ACACCACTGC GGGCCTCCGC GCGATCGAGT CGGAATCGGA AGTGGTTTTG
AAAGGCACGC GTGTGGACGG CGTTTACACG GCCGATCCGG AGAAAGATCC TACCGCCACG
AAGTATTCCC AGCTTACATT TGACGAGGCA TTATCCAAAA ACCTCAAAAT CATGGACCTT
ACCGCATTCA CATTGTGTAA GGAAAACGAC CTGCCGATCA TCGTATTCGA CATGAACAAG
CCCGGTAACC TTTATGAGCT CGTAATGGGC GGTGAAGTCG GAACCCTGAT TTCGAATCAA
TAG
 
Protein sequence
MPEPKYKRLL LKLSGEALNG GDKAQVIDFN ILDNYAKEIK RITEVGVQVA IVIGGGNIFR 
GASVEKSGID RVQGDHMGML ATVINGMAIQ SSLEKHGMNT RLMSAIKMEQ VCEPLIRRRA
IRHLEKGRVV IFGAGTGNPY FTTDTTAGLR AIESESEVVL KGTRVDGVYT ADPEKDPTAT
KYSQLTFDEA LSKNLKIMDL TAFTLCKEND LPIIVFDMNK PGNLYELVMG GEVGTLISNQ