| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2984 |
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| Symbol | |
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| ID | 8226557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3651541 |
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| End bp | 3652146 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930814 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003087364 |
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| Protein GI | 255036743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTCCAAT ACTTCCTCAT TTACAAGCCA TTCAACATGC TCTCGCAATT TTCCCGCGAG
GGCGATCATC AGACACTGGC TGATCTCGGT TTTACATTTG CCAAAGATAT TTACCCCGTC
GGTCGGCTGG ATGCCGATAG CGAAGGGCTG TTGCTTCTCA CCAACGACAA TTTTCTCAAA
ACAAAACTCC TCGAACCACG CAACAGGCAC ACCCGCACAT ACTACGTGCA GGTAGAAGGT
GAAGTGACCG ACGAGGCTTG CCGGCAACTG TCGGCCGGCG TGAGCATTTC CATCAACGGG
AAACAATACA AAACGCTACC GGCCGAAATT GCGAAGATAG CGGAGCCGGA GCTGCCCGAA
CGGAACCCAC CCATTCGTTT CCGGAAAAAT ATACCTACTT CGTGGCTGTC GGTTACATTG
CGTGAAGGCA AAAACCGGCA GGTACGGCGG ATGACCGCGG CGGTGGGTTT TCCGACCCTG
CGGCTGGTGC GGTGGTCTAT CGGAAAAATT TCATTGGCGG ACAAAAAAAT AAATTTTCCT
AACCCCGGGG ACGTATGGGA AGTTACACCA AAAGAGGCCA AACTTTTTTA TGAAAGAACC
ATTTGA
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| Protein sequence | MFQYFLIYKP FNMLSQFSRE GDHQTLADLG FTFAKDIYPV GRLDADSEGL LLLTNDNFLK
TKLLEPRNRH TRTYYVQVEG EVTDEACRQL SAGVSISING KQYKTLPAEI AKIAEPELPE
RNPPIRFRKN IPTSWLSVTL REGKNRQVRR MTAAVGFPTL RLVRWSIGKI SLADKKINFP
NPGDVWEVTP KEAKLFYERT I
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