Gene Dfer_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2979 
Symbol 
ID8226552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3645598 
End bp3646431 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID644930809 
ProductATP/GTP-binding 
Protein accessionYP_003087359 
Protein GI255036738 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0296682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA AACATTTCCT GATTGCATCG CTGCTAACCT CATTCACTGC CCTATCCACT 
CAGGCACAAC ATTCGCTTAC CCAGCTATGG TCTTCGGAGG CATCGCTGCC GGTTCCGGAA
TCGGTGCTGT ACAGCGCGGC GGGGAAAGCG CTTTATGTGG CGCAGATCGA CGGTAAAGCA
GGTGAAAAAG ACGGCAAAGG AGGTATCGCG AAGGTCGGCC TCGATGGCAA GATCATCGCG
CAGGACTGGG TAACCGGCCT GAATGCACCG AAAGGAATGG GCATCAAGGG CGGCAAACTG
TTTGTGGCCG ACATTACCGA GGTTGTAGAA ATCGATATCA AATCGGGCAA AATCGACAAA
AAGCATCCGG TAGAAGGCTC CAAGTTCCTG AACGACCTCA CTATCGACTC CAAAGGCACG
ATTTACGTTT CCGACTCGGA CACCAAGAAA GTGCATGCGA TCAAGGACGG CAAGGTTTCA
ACCTATTTTG AAGACCTGAC CCGCCCGAAC GGCTTGCTGG CCGTGGGCAG CGACCTTTTG
ATCGCCGATA GCGGCACTTT GAAAAAATTG AGCCCTTCCA AACAAATCAC TGTGCTGGCA
GAAGGAATGG ACAAAAGCAC CGATGGCATC GAGCAGGTGA AACCGGGCGA ATATATTGTT
TCTTGCTGGG CAGGTGTAGT GTATTACGTT AAATCAGACG GAACAACCGA AAAATTGCTC
GATACGACTG CTGAAAAAAC GAATTCGGCA GATATAGGTT ACGACCCCGT GAAGAAGATC
GTGTACGTCC CTACATTCAT GAAAAACAAT GTCGTGGCAT ATCAATTAAA GTAA
 
Protein sequence
MKTKHFLIAS LLTSFTALST QAQHSLTQLW SSEASLPVPE SVLYSAAGKA LYVAQIDGKA 
GEKDGKGGIA KVGLDGKIIA QDWVTGLNAP KGMGIKGGKL FVADITEVVE IDIKSGKIDK
KHPVEGSKFL NDLTIDSKGT IYVSDSDTKK VHAIKDGKVS TYFEDLTRPN GLLAVGSDLL
IADSGTLKKL SPSKQITVLA EGMDKSTDGI EQVKPGEYIV SCWAGVVYYV KSDGTTEKLL
DTTAEKTNSA DIGYDPVKKI VYVPTFMKNN VVAYQLK