Gene Dfer_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2977 
Symbol 
ID8226550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3644449 
End bp3644961 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID644930807 
Producthypothetical protein 
Protein accessionYP_003087357 
Protein GI255036736 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.250173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ACACACCAAA GCAATACCTC GAAGCCGACG ACACGCCGGG CGCTGCATTC 
AATGAACCTT ATGCTGCCTA TCATGGCGCA CCGAATCCAG GCATCATCTT CAAAACTCCC
CTCCATCGGC CCGAGAGCCA GATGACCAGC TTCCAGAAAA TCGATATGAT CCGGAAAGGG
ATCAGTAAGA ATGATTTTGA GCGGTTTAAG AACAAAGCCG GCCTCGATTA TGACCAACTG
GCTCATGCAT TGTCGGTGGC GCGTGCTACC CTCATTAATA AAAAAGGGGA TGAGAAATTC
AACCAGGCGC TAAGCGAGCG GATCGTGAGC CTGGCGGATA TCTATTCTTA TGGTTATGAG
GTTTTTGAAG ATGTGGAGCG CTTCAATAGC TGGGTGTTCA GGCCGAACCC GGCGCTGGGC
GGTCAGCGGC CTTTTGATTT TCTGGACAAT CAGTTTGGCC GTGAAGAGGT CAGAAACATG
ATTGGCCGGA TCGACTATGG CGTTTACTCT TAG
 
Protein sequence
MKKHTPKQYL EADDTPGAAF NEPYAAYHGA PNPGIIFKTP LHRPESQMTS FQKIDMIRKG 
ISKNDFERFK NKAGLDYDQL AHALSVARAT LINKKGDEKF NQALSERIVS LADIYSYGYE
VFEDVERFNS WVFRPNPALG GQRPFDFLDN QFGREEVRNM IGRIDYGVYS