Gene Dfer_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2905 
SymbolrecR 
ID8226478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3570960 
End bp3571574 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content53% 
IMG OID644930735 
Productrecombination protein RecR 
Protein accessionYP_003087285 
Protein GI255036664 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.989615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC CCTCACGTCT TATTGAGGAA GCCGTAGCCG AAATATCCCG TCTCCCGGGA 
ATAGGCAAAA AAACCGCATT GCGCCTGGCA CTGCATTTGC TGAAAAGGGA TGAAGAGCAA
ACGCGCTCGC TGTCCGATGC ACTGCTGAAC ATGCGCACCA AAACCACCTA CTGTTCCCGC
TGCCACAACA TCGCCGACGA TACGCTTTGC AACATTTGCA GCAATAACAA GCGCGACCAA
GCCACCATTT GCGTGGTGGT AGACACGCGC GACGTCCTGG CGATCGAATC CACGAACCAG
TACCGGGGCC TTTATCACGT GCTCGGAGGC ATTATTTCGC CTTTGGAGGG CATCGGCCCG
TCGGATCTGG AAATCGATTC GCTGATGTCG AGGATAGAAA AAAAGGAAGG CGACGAGGCC
GTTCGGGAAG TGATACTAGC GCTCAGCCCC ACAATGGAAG GCGACACCAC CGCATTTTAC
CTTCAAAAAA GGCTCAAAGC CCTGGGCGTA AAAATAAGCA CTATCGCGAG AGGTATTCCC
ATAGGCGGCG ACCTCGAATA TGCGGACGAG ATCACACTTG GCCGCAGCAT TGTAAGCCGG
GTGGCTTATG ATTAA
 
Protein sequence
MNYPSRLIEE AVAEISRLPG IGKKTALRLA LHLLKRDEEQ TRSLSDALLN MRTKTTYCSR 
CHNIADDTLC NICSNNKRDQ ATICVVVDTR DVLAIESTNQ YRGLYHVLGG IISPLEGIGP
SDLEIDSLMS RIEKKEGDEA VREVILALSP TMEGDTTAFY LQKRLKALGV KISTIARGIP
IGGDLEYADE ITLGRSIVSR VAYD