Gene Dfer_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2835 
Symbol 
ID8226408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3500491 
End bp3501099 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content54% 
IMG OID644930665 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003087215 
Protein GI255036594 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.968767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTACG AAATTGAAGA CGAACTCGGC AACGTATCCA CTTTACAGCT TAAACAGCGG 
CTAACCGAGG AACAGATCGA ACCGCCCCAA GCTGGCGAAC CGGCACCGCT GTTTTACCTC
CGGAATGAGG AAGGGCTCCC GGTTACTTCG CTCACGATCG GCTCGTCCGA TGGCGATTCG
CGGTCGGTCC TTGACTTGGT CCGTTTCAAA CCGCTGGTTC TCAGCTTTTA CTGCAACTGC
TGGGGAAGTT ATGCGCCCAA ACACCTGGAA GCCATGAAAG AACTCGCGCC GCGGGTGGAG
GCGCTGGGCG GGCAGCTGCT GATCCTCACG AACGAATCTC AAAAGGAAAT CGGGCGCATT
GCCAGGAAAC TGGACGCCGA AGTGCCGATT TATCACGATA AAAATTACAA TGTTGCGCGC
TCCTACGGCG TGTTTTCGGA AACGTCGCCA ATCTGGGACC GCATTGCCGG CATTTCAGAC
GAGGTTTTTA CGCCCTCACT GTTCGTCCTC GGCCGCGACC GTCGGATTGG TTATGCGTTT
GTAGATGAAA ATTTCGATAA TGCGCCCGAC CTGAAAGCGA TTCTGAAAGC CATTTACGAC
GGCCGGTAA
 
Protein sequence
MYYEIEDELG NVSTLQLKQR LTEEQIEPPQ AGEPAPLFYL RNEEGLPVTS LTIGSSDGDS 
RSVLDLVRFK PLVLSFYCNC WGSYAPKHLE AMKELAPRVE ALGGQLLILT NESQKEIGRI
ARKLDAEVPI YHDKNYNVAR SYGVFSETSP IWDRIAGISD EVFTPSLFVL GRDRRIGYAF
VDENFDNAPD LKAILKAIYD GR