| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2824 |
|---|
| Symbol | |
|---|
| ID | 8226397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3488756 |
|---|
| End bp | 3489379 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644930654 |
|---|
| Product | phage shock protein C, PspC |
|---|
| Protein accession | YP_003087204 |
|---|
| Protein GI | 255036583 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.385991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AATTGCATCG CATACCTGAC CAGGCAGTTT TCGGGGGAGT TTGCGCGGGA
ATCGCTCAGT ATCTGCAAAT TGACGTCGTT ATCGTGCGCG TCCTGTTTGT AGTAATGGCC
CTACCGATAT TGCCTCCCGG CTTCGGAATG ACGGGATTGA TATACATTAT CCTGTGGGCA
GTGTTGCCGA CCGGCCCGGC CGGTGAAGTT TACACCGCGC ATACCACATT CGGCTCCGAG
CCATCCAAAC CGGCCGAGCC GCTGTTCGAC AAGAAGCGGT CCGATCAAAC GATGATGATC
CTGGGCGGCG TGCTGATTTT CTTCGGAGCA TTAATGCTCG TGGACGACTT CCCGATCTGG
TACCAATTCA AAAAATATTT CTGGCCCATC GTGCTGATCG GCATTGGTGC GTTCCTGATC
CTTCGCCAGC GTGACAAGGA GCAGGAGAAC AAAGGAACGG TATATCCCAC CACGCCTCCG
CCAACGGAAC CCGTAGATCC GGGACCCGAT CCGCAGCCGT ACACCCCATT TTCGCCCGGC
TCTACGGCGC AACCGCATTT CCCGGAAGAT CCCGAGCTGA AAAAGCCCGG CACCGATGAC
GACGACGTCA TCAAGGTCAA CTGA
|
|---|
| Protein sequence | MEKKLHRIPD QAVFGGVCAG IAQYLQIDVV IVRVLFVVMA LPILPPGFGM TGLIYIILWA
VLPTGPAGEV YTAHTTFGSE PSKPAEPLFD KKRSDQTMMI LGGVLIFFGA LMLVDDFPIW
YQFKKYFWPI VLIGIGAFLI LRQRDKEQEN KGTVYPTTPP PTEPVDPGPD PQPYTPFSPG
STAQPHFPED PELKKPGTDD DDVIKVN
|
|---|
| |