Gene Dfer_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2744 
Symbol 
ID8226316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3391953 
End bp3393320 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content53% 
IMG OID644930573 
Producthistidine kinase 
Protein accessionYP_003087124 
Protein GI255036503 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.805709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AAGACCGTAT CGCCCTCCAA TTTACGCTGC TGGTAGCGGG GGTGCTGCTG 
GTATTTTCCA TTGCGATTTA CAGCGTTTCG GAGCATTACC GCCAGGAGGA ATTTTACGAC
CGCCTCCGCG GCCGAGCCCG CACGACCTGC CGGCTGCTCG TGAAGGTGAA GGGGATCGAT
AAGGATTTGC TCAAAGCGAT CGACCAGAAC ACGCTGTCGG AAATGCTTGA TGAAAAGGTG
CTGATTTTCG ATTCGCGGAA CGAGCTGATC TATTCCAGCG TCGACGACAA GCTGCTCACT
TACCACGCAT CGCTGCTGAA TGAGGTACGC CAGAAGCAAT ACATGGAGTT TCACCAGGGC
GAGAACGAGG TGATCGGGCT GCTGTACCAG GAAGGGGACG ATCCGCTGGT GGTACTGGCC
TCAGCCTATG ATACTTTCGG GCACAGCAAG TTGCAGAATT TGCGCAGTAC ATTGGGCTGG
GGATTGCTGG CGGGAATGGC GGTTACCGTC GGGCTGGGTA TTTATTTTGC AGGAAATGCC
TTGAAACCCA TTAGCCGCAT CAACGCGCAG GTATCGCTGA TTACGGCCCA AAACTTGTCG
CAGAAACTGG ATGAAGGCAA CCGGAAAGAT GAAATTGCAC AGCTAGCCAT CAATTTTAAT
ACCGTACTCT ACCGGCTCAA CAAGGCATTT GAACAACAAA AAAGCTTTGT TTCCCACGCT
TCCCACGAGC TCCGGACGCC CCTTGCAGCA CTGAAATCGG AAATCCAGCT CGGCCAGCGG
TTCAATAAGA ATAACCCGGA GATCGAAGAG GTGTTCGCCA ACCTGTTTTC GGATACCGAA
CGGCTTATCA GCATTACCAA TAACCTGCTC TTCCTGGCGC GCTCGTATGA GAATATCGGC
AGCATGAAGA TGTCGCAGAT ACACATCGAG GACCTGGTTT TTCTTGCCAA AGAAGAACTG
CTCTCCTCCC ACCCCGATTA CAACGTCGTG ATCGACTATG AGACGATCCC CGAAAACGAG
AACGAAACTG TCGTGGAAGG CAATGAGGAG CTGCTCAAAA GGGTGTTTTC CAATCTGCTG
GATAATGCGT GCAAATATTC GTCCGACCAT CGTGCGCACA TTCTCATTTC ATCGGACGAT
CGGGAATGCG TTGTAAAAGT CCGCGACCAG GGCATAGGCA TCAGTAAAGA TGATCTGCCG
CACATTTTCA ACCCGTTTTT CCGGTCTTCG AACGCCACCG AGCTGCCCGG GTTCGGGATC
GGGCTTTCCA TTTGCCAGCG CATTACGGAG CTGCACCACG GGAGCATTTC CGTGCAGAGC
GAAATCGGCC GGGGAAGTGA ATTCCGCGTG GTCCTGAACC ACGTTTGA
 
Protein sequence
MKIKDRIALQ FTLLVAGVLL VFSIAIYSVS EHYRQEEFYD RLRGRARTTC RLLVKVKGID 
KDLLKAIDQN TLSEMLDEKV LIFDSRNELI YSSVDDKLLT YHASLLNEVR QKQYMEFHQG
ENEVIGLLYQ EGDDPLVVLA SAYDTFGHSK LQNLRSTLGW GLLAGMAVTV GLGIYFAGNA
LKPISRINAQ VSLITAQNLS QKLDEGNRKD EIAQLAINFN TVLYRLNKAF EQQKSFVSHA
SHELRTPLAA LKSEIQLGQR FNKNNPEIEE VFANLFSDTE RLISITNNLL FLARSYENIG
SMKMSQIHIE DLVFLAKEEL LSSHPDYNVV IDYETIPENE NETVVEGNEE LLKRVFSNLL
DNACKYSSDH RAHILISSDD RECVVKVRDQ GIGISKDDLP HIFNPFFRSS NATELPGFGI
GLSICQRITE LHHGSISVQS EIGRGSEFRV VLNHV