Gene Dfer_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2676 
Symbol 
ID8226248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3301869 
End bp3302411 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID644930507 
Productphosphoribosyltransferase 
Protein accessionYP_003087058 
Protein GI255036437 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCC AAAAACGATT AGTACTCAGC AGCCCCCTTC TGGAAATAAT GATCAGTCGG 
CTATGCCAGC AAGTGATTGA GAATCACCAG GATTTTTCTA ACACGGTCGT CATGGGCTTA
CAGCCGCGGG GAATCCACTT TGCCGAACGC ATTGTAGAGG AACTCCGCGC GAAGACGGGC
CAGAATATCC TCGTGGGGCA TCTTGACGCT ACCTTTTACC GGGACGATTT CCGCCGCCGC
GAGTCCCCGC TCGTGCCGAA CAAAACCAAT GTACCTTTCC TGATCGAAGG CAAAAAAGTG
ATCCTGATCG ACGACGTGCT CGCCAGCGGA CGCATGGTGC GCGCCGCGCT GGACGCCATG
ACGGCATTTG GCCGCCCCAA AGTGGTGGAA CTGCTCGTGC TGATCGATCG CCGCTACAAC
CGCGAACTGC CGATTGACCC CGATTATGTC GGAATGGAGG TGAGCACGCT GGAAACGCAG
CGTGTGCAGG TGGAATGGAA AGAACAGGGC TTCGAGGCTG ACCATATCTG GCTCGTCGAC
TAG
 
Protein sequence
MIPQKRLVLS SPLLEIMISR LCQQVIENHQ DFSNTVVMGL QPRGIHFAER IVEELRAKTG 
QNILVGHLDA TFYRDDFRRR ESPLVPNKTN VPFLIEGKKV ILIDDVLASG RMVRAALDAM
TAFGRPKVVE LLVLIDRRYN RELPIDPDYV GMEVSTLETQ RVQVEWKEQG FEADHIWLVD