Gene Dfer_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2668 
Symbol 
ID8226240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3292478 
End bp3293293 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID644930499 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003087050 
Protein GI255036429 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAA AACTATCTTT TAAAGTGAAG TTTAATTTGA ATACAATGAA AAAAGGATTT 
TTAATGCTTG CAATCGGGCT GATGAGCCTG GTGTCGATGG ATGGTATGTC ACAAAAGAAA
AACAAGGTGA TCGCGCACCG CGGCGCCTGG AAAAATACCG GCGCAACCGA AAACTCGATC
GGTGCGCTGG AACACGCGAT CAAGCTGGGC TGCTATGGCA GCGAGTTTGA CGTGCACATG
TCGGCCGATT CGGTTTTGTA TGTTTTGCAC GACCATTCCA TTCAGGGAAC GGACATCGAA
AAGACAAATT CAGCCGAGCT TTCAAAAATT AAACTGGCTA ATGGCGAGCA GCTGCCTACG
TTGGAGGCTT ATCTGAAAGC GGGTTCGAAG CAGAAGAAAA CGCGTTTGAT CCTCGAAATC
AAAACATCGA AGATCAGTAA GGAGCGCTCG CTTGCGTTGG CGACCAAATG CGTGGAATTG
GTTAAGAAAA TGAAAGTCGA AAAAATCACG GACTACATTG CATTCAGCTG GGATGTGTGC
CTGAAAGTGA AAGAACTCGC GCCGAAAGCG CACGTGGAAT ATCTGAACGG AGACAAAACG
CCCGACGAAA TCCAGGCAGC CGGCCTCGAT GGCATCGACT ACCACTATAC CGTTTTGAAG
AAAAAAGAAG ATTACATCCC CGCAATGCGC CAGAAAAAGC TGACTACCAA CGTGTGGACA
GTAAACAGCG AAGAAGATTT GAAATACTTC CTCGAAAAGG ACGTGGATTA CATTACCACC
AACGAACCCG AGCTGTTGCT GAGCCTTTCA AAGTAA
 
Protein sequence
MSRKLSFKVK FNLNTMKKGF LMLAIGLMSL VSMDGMSQKK NKVIAHRGAW KNTGATENSI 
GALEHAIKLG CYGSEFDVHM SADSVLYVLH DHSIQGTDIE KTNSAELSKI KLANGEQLPT
LEAYLKAGSK QKKTRLILEI KTSKISKERS LALATKCVEL VKKMKVEKIT DYIAFSWDVC
LKVKELAPKA HVEYLNGDKT PDEIQAAGLD GIDYHYTVLK KKEDYIPAMR QKKLTTNVWT
VNSEEDLKYF LEKDVDYITT NEPELLLSLS K