Gene Dfer_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2648 
Symbol 
ID8226220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3269885 
End bp3270862 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content55% 
IMG OID644930479 
ProductABC transporter related 
Protein accessionYP_003087030 
Protein GI255036409 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT CCCGTCCGAC GCTACGCGCA CAGCAAATCA CCAAAACATT TGGCCATGAC 
ACCGTCCTTT CCGCCGTCGA TCTCGAACTG GCGCCGGGGG AATGGCTGGG TATCCTGGGT
GAAAGCGGGT CGGGGAAAAG CACCTTGCTG CGCATTCTGG GGCGTTTCCT GGATGCGGAG
CAAGGTGATG TTTTTTTCAA AGGGCAACTG CTGAAACCCG TGGCCAGCGA GCTGATGCCC
GGCCACGAGG CCATCCGGCT CATTCACCAG GAGTTTGAAC TGTTCCCGAA CCAAACCGTG
GAGGAGAATA TAGCTTATTC GCTGCGTTTC TACGAGCCGG ATTACCGACA CGAGAAAGTA
GCGGAGCTTT TGGAAACCAC CGCATTGAAA AACGTGAAAG ACCGGAAGGC AAAGTTGCTC
TCAGGCGGTG AAAAGCAGCG CACAGCCATT GCAAAAGCCA TCGCCGAACT GCCCGACGTG
CTGCTGCTCG ACGAGCCTTT CGCGCATTTG GACAATCACA ACCGCCGCGT GCTCGCCGAC
GCGATCGAAC GCCTGCGCAG GCAGCAGAAG ATGAGCTGCA TATTCGTCAC GCATGAAGCC
GCCGACGCGC TGGCCTGGTC GGACCGCATT GCCGTGCTGC GCGATGGGAA AATCGTCCAG
ATCGGCACGC CGCAGGAGGT TTATAACAAT CCGGTAAACA GCTACGTGGC CGAACTGACG
GGAGATATCA ACTGGCTGGC GGGTGACCAG GGCAAAAAGC AATTCTACAT TCGCCCCGAG
AAGATCAAAC CCACCCGAAA ACCCGAAAAG AGCCGTTGGA TAGGCAAAGT GGAAGCGGTG
CGCTTTCATG GCAACCATTG GGAAATTCGT TGTTTAAAAG GGAAAGAGCA ATTATCCTTT
TACCGCAACA AGCCGGATCT CGAAATCGGG CAGGAAGTGC ATCTTACTTA TGCTTCCAAA
GACCTCAAAA GCATTTAA
 
Protein sequence
MKQSRPTLRA QQITKTFGHD TVLSAVDLEL APGEWLGILG ESGSGKSTLL RILGRFLDAE 
QGDVFFKGQL LKPVASELMP GHEAIRLIHQ EFELFPNQTV EENIAYSLRF YEPDYRHEKV
AELLETTALK NVKDRKAKLL SGGEKQRTAI AKAIAELPDV LLLDEPFAHL DNHNRRVLAD
AIERLRRQQK MSCIFVTHEA ADALAWSDRI AVLRDGKIVQ IGTPQEVYNN PVNSYVAELT
GDINWLAGDQ GKKQFYIRPE KIKPTRKPEK SRWIGKVEAV RFHGNHWEIR CLKGKEQLSF
YRNKPDLEIG QEVHLTYASK DLKSI