| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2627 |
|---|
| Symbol | |
|---|
| ID | 8226199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3244696 |
|---|
| End bp | 3245883 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644930458 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_003087009 |
|---|
| Protein GI | 255036388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACA ACATCGACCG TCGTAACCTG TTGAAGTCCG GTTTAATGGC ATTGGGCGGA
ATGGCCATCG CCCCGCACCT TACTGCCGGT GCTTTTGAAA ATACTCCATT GTCGCTCGAC
CCGGAAAACC GCATTTACCG CAGCCCGATG GTGCGCGAGC ATTTCCTGCC TTCGGATTTC
AAAGCACCAA AAATCGTAGC GAAACTGAGT TCGAACGAAA ACCCATACGG CCCGCCGATG
ACGGCACAGA AAGCCGTGGC AGAATCCGTG AAAAACGGTA ACCGTTACGC CTGGAAGGAA
ATGTACGACC TCATTGATAA AATCGCAAAA AAAGAAGGCG TGACGCCCGA CCACATCATG
ATGGGCCCCG GCTCGTCGGA TCTGCTGGAA AAAGTGGCAT TGGTCACCTT CATGAAAGGC
GGCAACATCG TCTCCGCCGA CCCTTGTTAT ATGTCGCTCG TGAGCGTGGC TAAATCCGTA
GGTGCTACCT GGAAGCCCGT TCCCTGCACG GCAGACTGGT CGCACGACCT GAAAGCGATG
GAAGCGGCCA TCGACAAGGA TACCAAGCTG GTATATGTTT GTAACCCAAA TAACCCGACC
GGCGCCATTA CGAAAGGCCA GGACCTGCTC GACTTCTGCT CGCGCGTGTC CGAAAAAGTG
CCGGTATTCG TGGATGAAGC CTACATCGAG CTTGCGGTAG GTGCCGATAC GCAAAGCATG
GTGTCGCTTT TGACCCAAAA GAAAAACGTG ATCATCGCCC GTACGTTCTC GAAAATCATG
GGTATGGCCG GTATTCGCGT GGGTTACATT GCCGCCCAGC CTGAATTCCT GGCCGGTATC
AACAAGATCA CCCGCGGCGG CATGGGCATT TCCTACACGT CGATCTTCGC AGCATCCGCC
AGTCTGGACG ACAAGGATTT CCAGGGCAAC ACCCGCAAAC TGAACCACGA GGCCAAAACA
TACCTTTACG AAAACCTGGA CAAGATGGGT TACAAATACA TCCCGTCGTA CACCAACTTC
GTCCTCTTCC CGATCTCCAT CCCGGGCAAG GAGCTGCTCT CCAAAATGAC CGCCAAAGGC
ATCGCCGTCC GCTCCTTCGA CGTCCAGAAT AAGCCCTGGT GCCGGGTAAG TATCGGTACG
ATGGATGAGA TGAAGGCATT TGTGGGCGCA CTGGGCGCAT TGAGCTAA
|
|---|
| Protein sequence | MNHNIDRRNL LKSGLMALGG MAIAPHLTAG AFENTPLSLD PENRIYRSPM VREHFLPSDF
KAPKIVAKLS SNENPYGPPM TAQKAVAESV KNGNRYAWKE MYDLIDKIAK KEGVTPDHIM
MGPGSSDLLE KVALVTFMKG GNIVSADPCY MSLVSVAKSV GATWKPVPCT ADWSHDLKAM
EAAIDKDTKL VYVCNPNNPT GAITKGQDLL DFCSRVSEKV PVFVDEAYIE LAVGADTQSM
VSLLTQKKNV IIARTFSKIM GMAGIRVGYI AAQPEFLAGI NKITRGGMGI SYTSIFAASA
SLDDKDFQGN TRKLNHEAKT YLYENLDKMG YKYIPSYTNF VLFPISIPGK ELLSKMTAKG
IAVRSFDVQN KPWCRVSIGT MDEMKAFVGA LGALS
|
|---|
| |