| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2612 |
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| Symbol | |
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| ID | 8226184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3227031 |
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| End bp | 3228218 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930443 |
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| Product | Cystathionine gamma-synthase |
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| Protein accession | YP_003086994 |
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| Protein GI | 255036373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.1335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC AGACCAAAGC GATACGTACC CAAACAGGCA AAACCAAGTA TCGCGAGCAT
TCGACTCCCC TCTTCCTGAC CAGCAGCTTC ACTTTTGAAA GCGCGGAGCA GGGCAAAGCG
CTTTTTGAAG AAACCGAAGA AGGCAACATT TACAGCCGGT TCTCCAATCC GAGCGTGCAG
GAATTTGTGG ATAAGGTGTG TATGCTGGAA GGTCTGGAAG ACGGCGTGGC CACGGCCACC
GGTATGGCGG CGGTGTTTGC AAGCATGGCG GCATTGCTGA AAAGCGGCGA CCACATCCTG
GCGTGTCGCG CATTGTTCGG CTCGGCGCAC CAGATTATCG CGCAGATTTT GCCAAAATGG
GGCATTACCC ACACTTACCT CGACGCTACT GCCACCGAGG AAGAATGGGA AGCAGCCGTA
CAACCCAACA CCCGGATGAT CTACCTCGAA ACTCCTTCCA ACCCTGGTTT GGACCTTGTG
GACCTCGCGA TGATCGGCCG CATTGCCAAA AAACACAGCA TTATATTCAA TGTAGATAAC
TGCTTTGCCT CGCCCGCACT GCAAACCCCG GCCGATTTCG GCGCCGACCT CGTGCTGCAT
TCCGCCACGA AGTTTATGGA CGGCCAGGGC CGCGTTTTGG GTGGTGTGGT TGTAGGTAAA
AAAGAATATA TCAAAGACTT ACGCTTTTTC TGTCGCCAAA CCGGCCCATC CATGTCGCCA
TTCAATGCAT GGGTTTTAAG CAAAAGCCTT GAAACACTTA GTCTGAGAAT GGAAAAGCAT
TCGTCCAATG CATTGGCGCT GGCCGCTGCC CTGGACAAGC ACCCCGACGT AAAAGCGGTA
AAATACCCAT TCCTGGAATC GCACCCGCAG CACACGCTGG CGAAACAGCA AATGAAAGCC
GGCGGAGCGG TAGTTACCAT CGAACTTGAA GGCGGCTTCG AACGCGTAGC GGCATTCATG
GACGCATTGG AGATCGCATC GCTATCGTCC AACCTCGGCG ACACCCGCAC GATCGTCACC
AACCCGAACA CCACGACCCA TGCCAAATTG AAGCCGGAAG AAAAAGCCGC GCTGGGCATT
ACCGAAGGTT TAATACGCAT TTCGGTTGGT TTGGAAGACG TTGAGGACCT GATCGAGGAT
TTCACAAATG CTGTGGAGGT GTCGGTGAAA AGTGATATAT TGGAGTAG
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| Protein sequence | MKKQTKAIRT QTGKTKYREH STPLFLTSSF TFESAEQGKA LFEETEEGNI YSRFSNPSVQ
EFVDKVCMLE GLEDGVATAT GMAAVFASMA ALLKSGDHIL ACRALFGSAH QIIAQILPKW
GITHTYLDAT ATEEEWEAAV QPNTRMIYLE TPSNPGLDLV DLAMIGRIAK KHSIIFNVDN
CFASPALQTP ADFGADLVLH SATKFMDGQG RVLGGVVVGK KEYIKDLRFF CRQTGPSMSP
FNAWVLSKSL ETLSLRMEKH SSNALALAAA LDKHPDVKAV KYPFLESHPQ HTLAKQQMKA
GGAVVTIELE GGFERVAAFM DALEIASLSS NLGDTRTIVT NPNTTTHAKL KPEEKAALGI
TEGLIRISVG LEDVEDLIED FTNAVEVSVK SDILE
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