| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2536 |
|---|
| Symbol | |
|---|
| ID | 8226108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3130747 |
|---|
| End bp | 3131268 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930368 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_003086919 |
|---|
| Protein GI | 255036298 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3652] Predicted outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGTT ACATACTCCT GCTACTTACA GCCATTTTTT TTGCAAGCGC TGCCTGCGAA
GACGACAAGA CGGCCGATTC CGGTTCGCTC ACTGATATCG ACAGACAATT TCTCCTCGCT
GCGGCCGACG ATGCCCTGTA CCAGGTCAAT GCGGGAAAAG TAGCCGCCGC GGGAGCTACC
GAAGATAAAA TCGGAGAATA TGGTGATGAA ATGACCAAAA ACCACACGCA GGCCGGACAG
GAGTTACAGA GGCTCGCCGC CGCCCGCGAC CTGAACCTCC CTACCACGCT CTCGGACGAC
CGGCAACTTC AACTCGACAG CCTCTCGGGG AATTCGGGTG TAACATTGGA TACATTATAT
GTAAAGCAGA TGATCTCGGC GCAGGAAAGA GCCGTGCATA TGATGGAAAT CCAGTCCACC
AGCGGGCATG ACGCCGAACT GAAACAATGG GCAACCGGCA GGTTGCCCGT GGTGCAGCAA
TTTGCAGAAC GCGCCAAAGC AATGCGGGAT TCGGTAAATT GA
|
|---|
| Protein sequence | MRGYILLLLT AIFFASAACE DDKTADSGSL TDIDRQFLLA AADDALYQVN AGKVAAAGAT
EDKIGEYGDE MTKNHTQAGQ ELQRLAAARD LNLPTTLSDD RQLQLDSLSG NSGVTLDTLY
VKQMISAQER AVHMMEIQST SGHDAELKQW ATGRLPVVQQ FAERAKAMRD SVN
|
|---|
| |