| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2533 |
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| Symbol | |
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| ID | 8226105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3125249 |
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| End bp | 3128560 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930365 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086916 |
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| Protein GI | 255036295 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.225458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTGTA ACGCAGCGTC TTGCGGCACG GCTGGGCAGG CTTATAACCT GTCTTTTCTG
ACAATCGGAA CCAATGTGAT CGATACTATG CCCGGAAATC TACCTCTCAG AAAACTTGTA
TTGGGTGTCA CGAAAAAGCT CTTTTTCCGG ATGCTTGCAG TCGCGGTGTT TTCCTTACTC
ACGCTTGCGC ATCGCGTTGC CGTGGCGGTG CCGCTGGTGG GGAACGAACA GGGTGTGAAT
GCAATGATAA GGGGGCATGT GAGTGATGAA AAAGGCGACC CGCTGGCCGG GGTAAGCGTG
GTAATTAAAG GCACTTCGCG CGGAACGACT ACCAATGCGG CAGGGAGGTA TGAGCTGGAA
ACCGCGTCCG GAGAGGATGC GCTGATCTTC TCTTTTGTAG GCTACCTGTC GCAGGAAATA
CCGATTGGGG CACGTTCGGA GGTGAACGTG ACAATGAAAG TCGATGCCAA AGCATTGAAC
GAGGTAGTTG TGGTGGGCTA TGGTGAAATG AAAAGGGCCG ATCTGACGAC TGCGCAAACT
TCGGTGTCGG CCAGGGACAT TGCCCGCACG ACCAATACTA CTTTGGAACA GGCCATTCAG
GGTCGGGCGG CTGGCGTGTA TGTGACGCAG AACTCGGGGC AACCGGGCGG CGGTATTTCG
GTGAATATCA GGGGTGTCAA TTCCATCAGC GGCAGTAATG AGCCATTGTA TGTGGTGGAT
GGTGTACAAA TCCAGGGACA GTCGGTGTCG TTCGGGGCGC AGAGCTCTTC CAATCCATTG
GCGGGTTTAA ACCCGGCCGA TATCGAATCG GTGGAAGTGC TGCAAGGGCC GTCTGCTACC
GCAATTTACG GCTCCCGGGC CACGAACGGC GTACTCCTGA TCACCACCAA AAGAGGCAAA
TCCGGCGATT CGAAGGTCTC CTATGGATAT CAATTCAGCC TTCAAACTCC GCCTAAGCCA
TTGAAAGTAA TGGATTTGCA ACAATACGCG CAAATGGTGG GAGAATACCA CCAACTTGCT
GGCGGTGAAA CGCCCGAAGA ATTTCTGGAC CCTTCACTGC TCGGCAAAGG TACCGACTGG
CAGAAGGAAT TGTTCAAAAA CGCGGCCATG CACAAACACC AGCTTAGCCT CAGCGGCGGC
AACGAGCGCA CTACTTACTA TTTGTCGGGC GAATACCTCA AGCAGGACGG TGTGGCCCTC
GGTTCCGGAT TTAACCGGTA CGCATTCCGC GTCAATCTCG ACAATAAACC ACGTGAATGG
GCGAGCATCG GGGCCAATCT CAGTTTTAAC CAAACAAACG ATAACCTCAC ATCCAGCCAG
GAAAACATCA TTTCAAATGC ATTGCAGCTG ACGCCGCAAG TGCCGGTCCG GAACCTGGAC
GGTAGCTGGG GCGGCGGCGA TGAAAATAAC GGCGCCAACA TTTTCGCCCC CGTGAACCCG
ATCGCCATTG CCAATCTGAC GACCAACAAA CTGACCAGAA GACAGTTGCT CGGCGGGCTT
AACGTCGGTG TCAGGCTCAT GGAAGGGCTG CATTTCAGAA CGTCGTTCAA TACGAACCTG
GGTTTTTCCA ACTCATCCTA CTACATCCCG ACTTACAAAA TAGGCTGGGC CCAAAACGTA
ACTGCCTCAT ATACGAACGG CTCCGGCCTG AATACCTACT GGAACTGGAA CCAGTTGGTG
GAGTACAACA AACAGTGGGG CAAGCACAGT ATCAACCTCA TGCTCAGCCA CGAATCGCAG
GAATCGTCGT GGAAAAACCT GGCCGGATCG AGGACGGGCT TTCTGACGAA CGACATCCTC
GACCTGGCAG CCGGAGATGC GCTCACTGCC GGTAATTCGG GCGGATCGGG CGAATGGGCA
ATGGAATCGT ATCTGGGAAG GCTTAATTAC AACTTCGGCG ACCGGTACAT CGTGACGGGA
ACCGTTCGGA GGGATGGGTC TGCCAATTTC GGTGCGGATA ATAAATGGGG CTTTTTCCCG
TCGGTGTCGG CTGCGTGGCG CGTGTCGCAG GAGCCGTTTT TCAATATTGC AGCGGTAAAC
GAACTGAAAC TGCGTTTTGA AACCGGTGTG ACCGGTAACC AGGGCAGCGG GGGCATTTAT
TCGCCCATGG GTACCGGCGC CACGCCCACC ACTACGGGGT TTCTTCCCAC CAAATATGCC
AATGCAGGGC TGAAATGGGA AGAGACAAAA ACAAACAACT TCGGCCTGAA CCTGGCCCTG
TTCCAGAACC GCATTCAGCT CGAAGTTGAC TATTACATCA AAAACACCGA CAACCTGCTC
ATGGAAAAGC CGCTGCCGTG GTACATGGGC ACGAATGGGA CCGGTGCCGT GGGTTCGCCG
ACGGTGAACA TCGGCGCGTT GCAGAACAAA GGGTGGGGGA TCACGGTGAA CACCGTCAAT
GTAAACCGGG GCGGTTTCAA ATGGGAGTCG AGCCTGAACA TTTCCAGTTT CAAGACTAAA
ATCAAATCGT TCTATTCCGA TGCGGCGTTT GTAGATCGCA CTTCCTGGTG GCTCGCCGAC
TGGACGCAGC GTTGCGAAGT GGGTAAGGCG CCCTGGCTAT TCCGCGGCTA CATTGAAGAG
GGCTTATTTC AAACGGTTGA AGAGATAGAA AACAGTCCAT TGCCAGTCGA TAACAACGGT
GTGAAATTGC CTGTCAATGA AAGTAATATC TGGGTAGGCG ATGTGAAATT CAAGGATGTA
AACGGGGACG GCATCATCAA TGAGAAAGAC CAGACGGTAA TCGGCAACCC GTGGCCGAAA
ATGTTCGCGG GATTCACCAA TACATTTTCT TACAAAGGTT TCGATTTGAG CATTTTGCTA
ACGAGTACCT ACGGAAACGA CGTCTACAAT TTCCTGGGCA AGCTCAATAC CAATGCCAGT
CATATCAACC TGAGCCGGAA CTTGCTTATA CATGCGATGG ATTACGCCCG GCCCGTCACC
AACACGGACG GGACGGTCGG GCTGTCGAAC CCGGGAACGG ACGTCGCGCG CATTTCCAAT
GGGCCAAACG GCAACTTTGG CCGGCATACC GATAAATGGG TGGAAGACGG CTCGTTTGTT
CGCGTTAAAA ACATATCGCT AACCTACAAC CTGCCGGTTT CGCTTGTGTC GCGGCAGAAG
GTGATCAGAG GAGCGCGGCT AACGGTGGGC GCTCAGAACG TCGCAACGCT GACCCGCTAT
TCCGGGTTCG ATCCCGAAGT AGGCGCCTAT GTTTCTCGGG ACGCCAGCCC TGCTAATCAG
GCGATCGGCC TGGATTACGG ACGGTATCCG CTGACGGCCG TGTACACATT CAGTTTAGGT
TTGGATTTCT AA
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| Protein sequence | MVCNAASCGT AGQAYNLSFL TIGTNVIDTM PGNLPLRKLV LGVTKKLFFR MLAVAVFSLL
TLAHRVAVAV PLVGNEQGVN AMIRGHVSDE KGDPLAGVSV VIKGTSRGTT TNAAGRYELE
TASGEDALIF SFVGYLSQEI PIGARSEVNV TMKVDAKALN EVVVVGYGEM KRADLTTAQT
SVSARDIART TNTTLEQAIQ GRAAGVYVTQ NSGQPGGGIS VNIRGVNSIS GSNEPLYVVD
GVQIQGQSVS FGAQSSSNPL AGLNPADIES VEVLQGPSAT AIYGSRATNG VLLITTKRGK
SGDSKVSYGY QFSLQTPPKP LKVMDLQQYA QMVGEYHQLA GGETPEEFLD PSLLGKGTDW
QKELFKNAAM HKHQLSLSGG NERTTYYLSG EYLKQDGVAL GSGFNRYAFR VNLDNKPREW
ASIGANLSFN QTNDNLTSSQ ENIISNALQL TPQVPVRNLD GSWGGGDENN GANIFAPVNP
IAIANLTTNK LTRRQLLGGL NVGVRLMEGL HFRTSFNTNL GFSNSSYYIP TYKIGWAQNV
TASYTNGSGL NTYWNWNQLV EYNKQWGKHS INLMLSHESQ ESSWKNLAGS RTGFLTNDIL
DLAAGDALTA GNSGGSGEWA MESYLGRLNY NFGDRYIVTG TVRRDGSANF GADNKWGFFP
SVSAAWRVSQ EPFFNIAAVN ELKLRFETGV TGNQGSGGIY SPMGTGATPT TTGFLPTKYA
NAGLKWEETK TNNFGLNLAL FQNRIQLEVD YYIKNTDNLL MEKPLPWYMG TNGTGAVGSP
TVNIGALQNK GWGITVNTVN VNRGGFKWES SLNISSFKTK IKSFYSDAAF VDRTSWWLAD
WTQRCEVGKA PWLFRGYIEE GLFQTVEEIE NSPLPVDNNG VKLPVNESNI WVGDVKFKDV
NGDGIINEKD QTVIGNPWPK MFAGFTNTFS YKGFDLSILL TSTYGNDVYN FLGKLNTNAS
HINLSRNLLI HAMDYARPVT NTDGTVGLSN PGTDVARISN GPNGNFGRHT DKWVEDGSFV
RVKNISLTYN LPVSLVSRQK VIRGARLTVG AQNVATLTRY SGFDPEVGAY VSRDASPANQ
AIGLDYGRYP LTAVYTFSLG LDF
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