| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2475 |
|---|
| Symbol | |
|---|
| ID | 8226047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3042929 |
|---|
| End bp | 3044764 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644930307 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086858 |
|---|
| Protein GI | 255036237 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.641856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAGAT ATTTGCTGTT GTTTCTGATG CTTTCCTTCT GCGCGTCGGC CCAAAACCCG
GACAGCCTGG AAATACACAG CCGCGACAGT ATCCGCTACA CCAACCTGAA AGCGCGGATG
TCCAAAACGA AGTTTTCGCG GGCCGTGTAC CGGCTGTTGT TCAGGGATGT GTATAACCAG
GGAAAGGTTA CCGAAGTAAA AGAGATCGAA ACCAACCCTT TCACACCCTA TGAAGGCATG
GTGATCCGGA AAATTTATAT CCGGCAACTC GACATGCTCG GTGAGTCCGT TTACGACACG
ACCCGGAAAG GGAACCAGCT CGAACGGTTT TTAAGTAAAA GCCTGCATAC CAACACCCGC
GAGGGCATTA TCCGAAGATC CTTCCTGCTT TTTTCGGAAG GCGACGATAT CCAGGCAAAA
GTTCTGAAAG ACACGGAGCG GCTCCTGCGG GAGAACCGGA TGTTCGTCGA TGCGCGTATT
ATAGTGATAC CGCGAAAGGA CGTGACCTGG ATGGCCGATA TTATAGTACT CATCCAGGAT
TCCTGGTCGC TCAATTTCTC GGGCGGTTTC AGCTCTTTCA ACAAATTCCG CGTAGGCCTG
GAAAACATCA ACGTCCGCGG GACCACGCAT TCCCAGCGAA CGGCCATCCG GTGGGATTCC
AAGGATTCGA TCCGCCCTTT CCAGTTTCGC GCCATTTACA CGGTTCCTTA TATTGGCAAA
ACCTTCATCA CGGCCCAGGC GAGTTTTATC CGTGAACGTG AGCTCGGTGA ACAATCGGTG
CGGTTTTTCC GCCGGTTTAT CACCACGGAA ACCAAATACG CGGGCGCACT CGAACTGGGG
CATTACAAAA CCCGGCAATA CAGGCGCGAG ATCGAAACAA TAGATTCCCT CACGCTGCTC
GAGACCGATT ACAATTACTA CGATTTCTGG ATCGGGCGCG CATTCAAGTT CCCGTTTCCC
GACAGCAAGC TGGCACAGAA CTCCCGCATT GTCACGGCAT TCAGGCATAA CAAATACGAT
TACGACGAGC GCCCCGACGT AGCGCCTAAT CTCAACAAAA ACTACTGGAA CCGCACGGCT
ACCCTGGTAA GCCTGGGCTT TTCGAACCGA AATTATAAAC GCGACGTACT CATCTACGGC
TTCGGACGGA CGGAGGACGT GCCCGTCGGT AGCCTGTTTG CGCTTACGAT CGGGCGCGAG
AATACGGAGT TCGGCGCGCG CGGTTATGGC GGTCTGCAAT TTGCGACGGG CAAATACCTG
CCGCATAACC TCGGCTATTT TTATGGATTG GCCAACCTGG GGACATATTC CAAAAACGGT
AAGGCGCAGC AGGGCGTTAT CAACGGCGAG GTTACCTACA TTAGCAATCT CATTCCGTTC
CGGTACAGTT TCTTCCGGCA GTTTGTCAAT GTCCGCTTCG CCAAAGGCAT TGCCCGCGAC
CCGCTCGATT ACCTGAACAT CAGCGGCGAC CGGGGCATCC GGGGCATTAA CAACGATCGG
CTCATCGGCA CGAAAAAGCT GACGATCGGC ACCGAAACTG TGTTTTTCTC TGATAAAAGC
CTTTTGGGCT TCCGTATCGC CTATTTTGTA TTCGCGGACC TGGGGCTCGT GAACGGCGTT
CCGCATTTGT GGGAAAGCCC CTTGTACCAG GGCTACGGGC TCGGTTTGCG GCTCCGGAAC
GAGAATCTCA CCTTTAATAC CTTGCAGCTG CGTTTCGGAT ATTATGTCAA TATCCCCGAA
CTCTCCTCAC CTACCCGCTT CGCAACTTCC GGCAACGTGC CGCTGCGCCT GCGCGACTTC
GACATCTCCG CTCCTTCCAT CGCGCCATTC CAGTAA
|
|---|
| Protein sequence | MCRYLLLFLM LSFCASAQNP DSLEIHSRDS IRYTNLKARM SKTKFSRAVY RLLFRDVYNQ
GKVTEVKEIE TNPFTPYEGM VIRKIYIRQL DMLGESVYDT TRKGNQLERF LSKSLHTNTR
EGIIRRSFLL FSEGDDIQAK VLKDTERLLR ENRMFVDARI IVIPRKDVTW MADIIVLIQD
SWSLNFSGGF SSFNKFRVGL ENINVRGTTH SQRTAIRWDS KDSIRPFQFR AIYTVPYIGK
TFITAQASFI RERELGEQSV RFFRRFITTE TKYAGALELG HYKTRQYRRE IETIDSLTLL
ETDYNYYDFW IGRAFKFPFP DSKLAQNSRI VTAFRHNKYD YDERPDVAPN LNKNYWNRTA
TLVSLGFSNR NYKRDVLIYG FGRTEDVPVG SLFALTIGRE NTEFGARGYG GLQFATGKYL
PHNLGYFYGL ANLGTYSKNG KAQQGVINGE VTYISNLIPF RYSFFRQFVN VRFAKGIARD
PLDYLNISGD RGIRGINNDR LIGTKKLTIG TETVFFSDKS LLGFRIAYFV FADLGLVNGV
PHLWESPLYQ GYGLGLRLRN ENLTFNTLQL RFGYYVNIPE LSSPTRFATS GNVPLRLRDF
DISAPSIAPF Q
|
|---|
| |