Gene Dfer_2437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2437 
Symbol 
ID8226009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2997599 
End bp2998633 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content52% 
IMG OID644930269 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003086820 
Protein GI255036199 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC ATACCCCATG GCCCCTTATC GCCAAGTACC TTGCTGGCGA ATGCAACCCC 
GAAGAGAAAC TGGCTATGGA ATGGTGGCTT GAAGACTATG ATAATCTCCG GATGTTCAGG
CGGATAGAAG CCGCATGGAA GCAGGAAAAA GAACCGGAAA ACGATCCGGC GCATAATCTG
GAAAGCGGAC TTGCGAGGCT GCATGCCCGC ATGGCGGAAC ATGCAGAAGT GCCCGCCCAG
GCCCTTTCCG GCACGTCCAG GCTTGTGAAG CTCAGTTCCT GGCTGGCCGC GGCGAGCATT
GTACTGGCAA TCGGATTGGG CTATTTCCTG GTGAACAGGC CGCACAGCGG CCATTCGAAT
GCCGGCATTG CGATGGAAAC CCGCACCAGC GGCTCGAAAG AAATTGTGAG TATCGAACTG
TCCGACGGGA CGCAGGTTTG GCTCAATAAA AACAGTAAAA TCGAATACCC GAAAGCGTTC
GACGGGGACG AAAGAGCGGT TTACCTGCAA GGAGAAGCGT TTTTTGAGGT AGTCCCGAAC
CCGGACAAAC CATTTATCGT GAAGTGCGAC AAGCTGTCCA CGCGGGTTTT GGGGACGTCG
TTCGATGTAA AAGCCTATAA TGGGGACGAG ACTGCATCGG TGTCGGTTGC GACCGGAAAA
GTAGAGGTTA GCAAGGAAAT CGAGGAAGGC GAGCCGGTCC GGATTACGCA ACTGACGCCC
GAGCAGGAAC TCGTGATCAA TACAGAAAAA GACGAAACGT ATATAAATAT CGTTAGCGTC
GCAAACATTG CGCCGTGGCA CCTGGGCCAG CTTGTTTTCC GGGACAATAC TTACGACGAG
GTAATGCAGG CATTGCAGGA GCGCTTCGGC AAACGGATTG TTTTTAAAAG CAGTATTGGT
CAATGCCGTG TAATGGCCAG TTTCAATTCC ACTGCATCAT TAAATGATGT GCTAAAACTA
TTGAGTATGT CCAATTCTTT CGACTATGTG ATCGGCCGGG ACGTCGTCAC GATCACCGGG
GGGACGTGCC GTTAG
 
Protein sequence
MSDHTPWPLI AKYLAGECNP EEKLAMEWWL EDYDNLRMFR RIEAAWKQEK EPENDPAHNL 
ESGLARLHAR MAEHAEVPAQ ALSGTSRLVK LSSWLAAASI VLAIGLGYFL VNRPHSGHSN
AGIAMETRTS GSKEIVSIEL SDGTQVWLNK NSKIEYPKAF DGDERAVYLQ GEAFFEVVPN
PDKPFIVKCD KLSTRVLGTS FDVKAYNGDE TASVSVATGK VEVSKEIEEG EPVRITQLTP
EQELVINTEK DETYINIVSV ANIAPWHLGQ LVFRDNTYDE VMQALQERFG KRIVFKSSIG
QCRVMASFNS TASLNDVLKL LSMSNSFDYV IGRDVVTITG GTCR