Gene Dfer_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2399 
Symbol 
ID8225971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2958568 
End bp2959272 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content54% 
IMG OID644930231 
ProductNUDIX hydrolase 
Protein accessionYP_003086782 
Protein GI255036161 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACT ATCCCCAGGC CTCCCGGATT CTCGTGGCCA TCGACTGCAT TATTTTTGGT 
TTTGATGGAA AGGATATCAA GCTGTTGCTG ATCAAAAGAA ACTTCGAGCC GGAGCAAGGC
AAATGGTCGC TGATGGGCGG CTTCCTGAAT GCCGACGAAG ACCTGGCCGA CGGCGCCGCC
CGCATTCTCT ACAATCTTAC CGGCCTTCAA GACATTTATG TAGAGCAGCT CGAAACCTTC
GGCAGGGCCG ACCGCGACCC CGGCGAGCGC ACGGTTTCCG TCGTGTTTTT TGCATTAATC
AAAATCGACG ACCACGACTC CGACGCGGTG AAGAGCCACA ACGCCTCGTG GATCACCCTC
GATGCCCGAC CGAAGCTCAT ATTCGACCAT GAAAAAATGG TACAGCGGGC CATCGAGCAC
CTTAAATACA ATGCCGCCCT GCACCCGATC GGCTTCGAGC TGCTGCCCGA GCGCTTCACG
ATCCCGCAGC TGCAAAAGCT CTACGAAGCC ATTTACAACA TCCCCATCGA CCGGCGGAAT
TTCAGCCGGA AGTTGCTTTC CACCGGCCTG CTCATCGATA CGGGGCTTAA AAACAATAAT
AGCGCCACGA AGAAGGCAGC ACTCTACAAA CTCGACGCCG AACGGTACAA GACGAAATTC
CACTCGTTCT GGAACTTTAT GCCGGACTCG ATGAAAAGCC AGTAG
 
Protein sequence
MTNYPQASRI LVAIDCIIFG FDGKDIKLLL IKRNFEPEQG KWSLMGGFLN ADEDLADGAA 
RILYNLTGLQ DIYVEQLETF GRADRDPGER TVSVVFFALI KIDDHDSDAV KSHNASWITL
DARPKLIFDH EKMVQRAIEH LKYNAALHPI GFELLPERFT IPQLQKLYEA IYNIPIDRRN
FSRKLLSTGL LIDTGLKNNN SATKKAALYK LDAERYKTKF HSFWNFMPDS MKSQ