| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2248 |
|---|
| Symbol | |
|---|
| ID | 8225820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2764564 |
|---|
| End bp | 2765553 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930084 |
|---|
| Product | peptidase S41 |
|---|
| Protein accession | YP_003086635 |
|---|
| Protein GI | 255036014 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.847922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA GCCTTACCCA TTTCATTGTT CTTGCATTAT CCCTCGTGAT GGCGGTAAGC
GCTGCAAGGC CAGGGCCGGG AGCCGGCCCG CCCAGCCGCG AGGCCAGCGC CTATTTCGAG
CAGGCATTTG CATTTATTCA GAACAATGCA TACTTCCACA AACATCTGGA TTTCGCGAAG
GTGAAGCAGC AGGCACTTGC CAAAATGCAG CATGCACAGT CGGCTGCGGA CACGCACGAT
GCCATTCGCT TTGTGTTGGA GCAACTGGAC GACCGGCATA GCTTTTTGCA GCCAGCCAGG
CCCGCCGGCG CGCCTTCCGG CAGCATTTCT GCCCGGAGTG TTATGCCGTT TGAGGTTTCG
GTGGAAGGGA ATTATGGCAT TATCAAACTG AAATCTTACA ATTCAACGGA TGCCGCCAAT
GCGCACAGGA TCGCCGACAG CCTGTACAAT TGCCTGCTGG ATTTCGACAA AAAGCATACG
AAAGGCACGA TCATCGACCT CCGGGAAATG GAAGGCGGAA CTTACATTCC GTTCGTAACT
GGCCTGGCGC CAATGATTGA CGCCGAGCAG CTGATCGGCT TTGTAGATCG CAAAGGGAAA
AAGGGCCGCA CAGTGCGCTA TCAAAACGGG ATTTATTACC AGCAAGGCCG CAAGAAGGCG
CGGCTCGGCT ACCTGACCCG GTACGAACGC CCCAATGCAG CGGACCGGCC CATTGCCGTG
CTGACGGGCC AGTACACGGC CAGCTCCGGG GAAATGATCC TCCTGTCCCT CAAAGGCCTT
CCGCGGACAC GCACTTTCGG TGCGCCGACT TACGGAGTCC CTACCGGAAA AGCCAACTTC
TTCCTCCCCG ACAGCAGCAT GATCTCGCTG ACAAATACCG CGTGTTTCGA CCGGCAAAAG
CAAATCCATT CAGGTGCCAT TCAGCCGGAT GTGCCTTGTG CCGAAAAGGA TGCCATGCGT
GAAGCAAAAA ACTGGATCGA CCATTTTTGA
|
|---|
| Protein sequence | MKQSLTHFIV LALSLVMAVS AARPGPGAGP PSREASAYFE QAFAFIQNNA YFHKHLDFAK
VKQQALAKMQ HAQSAADTHD AIRFVLEQLD DRHSFLQPAR PAGAPSGSIS ARSVMPFEVS
VEGNYGIIKL KSYNSTDAAN AHRIADSLYN CLLDFDKKHT KGTIIDLREM EGGTYIPFVT
GLAPMIDAEQ LIGFVDRKGK KGRTVRYQNG IYYQQGRKKA RLGYLTRYER PNAADRPIAV
LTGQYTASSG EMILLSLKGL PRTRTFGAPT YGVPTGKANF FLPDSSMISL TNTACFDRQK
QIHSGAIQPD VPCAEKDAMR EAKNWIDHF
|
|---|
| |