Gene Dfer_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2100 
Symbol 
ID8225672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2563666 
End bp2564019 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID644929937 
Productresponse regulator receiver protein 
Protein accessionYP_003086488 
Protein GI255035867 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.515459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC TTTATGTTGA CCATGAAATT AATAATCTGA ATTCCTTCAA AGCGACCTTC 
CGCAGGGATG CCAAGATTTA CCTGGCCAAG TCAACCGAAG AAGGTTTGAA GATCCTCGAC
GAGCATAAAA TCGACGTCAT TTTCGCCGAT CATCAGATGC CCGAAATGAC AGGGCTGGAA
TTCCTCAAAC ACGCTTCGAA CCAATATCCT TCCAGTATGC GCGTGCTGCT TACCGGCAAT
GCATATACCG AAGAGTTTCG CTGGGCAGCC GGCAAAGGAT ATTTCCATAG CTATGTGAAC
AAGCCCTGGG ACGAGCAGCA GCTTCGGACG CTGATGGTTT CGCGTCTGTA CTAG
 
Protein sequence
MSILYVDHEI NNLNSFKATF RRDAKIYLAK STEEGLKILD EHKIDVIFAD HQMPEMTGLE 
FLKHASNQYP SSMRVLLTGN AYTEEFRWAA GKGYFHSYVN KPWDEQQLRT LMVSRLY