Gene Dfer_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1992 
Symbol 
ID8225564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2432275 
End bp2433357 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID644929829 
ProductBeta-ketoacyl synthase 
Protein accessionYP_003086380 
Protein GI255035759 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACA TTGGTGCGGA GGTCATCGTG AGCCCGCTGG GCGACAGCGC GGAGGCTAAC 
TGGCAGGCGC TGAACGAAAA CCGAAGCGGG ATTGCGCTCG TGACTTCGGC GGGTTTTAAC
GGGGAAGACA TTCATTTGTC CAAAATAACC GGCCTGAATG GGCCATTGCG TTTCCAGCAG
CTGGTTATCA AGGCATTAGC GGCGCTCGAA CAACGCATTG ACGCATCCAT TCTCACTTCC
GAGCGCACGA TCGTGCTGAT CAGCTCCACC AAGGGCGCGC TGGATGACCA TCTTTCAGAC
CAGTTTGGCG ACACCTGCAC GGCGGTAATG CAGCGGTTCG GTCTTGCGCA TTTGCCGATG
GTGATTTCCA ATGCCTGCAT TTCGGGCGTG CTCACGCTGA ATGTGGCTGG GAATATGATT
GAAGGCGGTC AATATGAGCA TGTTATCGTG ATGGGTTGCG ATGTGGCTTC GGACTTTGTG
CTGTACGGTT TTCAATCCCT GTTTGCCGTA AGCGACAAGC CTTGCGCGCC GTTTGACGCC
GCGCGAAACG GCATTACACT CGGAGAAGGG TGTGGGGCTG CGCTGGTTTC GGCTACGCAA
TCGGTTTTCA AAAACACCCC GTTGCAGCTG CTCACAGGCA CAAGTGCAAA CGACGCCAAC
CATATCTCCG GACCGTCGCG CACAGGCGAG GGCCTGGTGC GCAGCGTGGC GCGGACGATG
CAGAAACACG GAACCGACGC AAATGACATC GATTTCATCT GTGCACATGG CACGGGGACG
GTTTTTAATG ATGAAATGGA ATCCATTGCA TTCAACCGGC TTTCCTTGCA GGACAAGCCG
CTGAATAGTT TGAAAGGCTA TTTCGGCCAT ACGCTCGGCG CCGCAGGCGT GATCGAAACG
GCCGTTTGCA TGCAGATGAT GCGGAATGGC ATGCTGATCA AAAGTTTGGG TTACCGCGAT
GCGGGCACGT CCATGCCTTT GAATATCATT CAGGAAAACG AACCGCGAAC GCTGCGGACG
ATCCTCAAAA CCGCTTCGGG GTTCGGTGGG GGCAATGCTT CGTTGATGAT CAGGAACTTA
TGA
 
Protein sequence
MIYIGAEVIV SPLGDSAEAN WQALNENRSG IALVTSAGFN GEDIHLSKIT GLNGPLRFQQ 
LVIKALAALE QRIDASILTS ERTIVLISST KGALDDHLSD QFGDTCTAVM QRFGLAHLPM
VISNACISGV LTLNVAGNMI EGGQYEHVIV MGCDVASDFV LYGFQSLFAV SDKPCAPFDA
ARNGITLGEG CGAALVSATQ SVFKNTPLQL LTGTSANDAN HISGPSRTGE GLVRSVARTM
QKHGTDANDI DFICAHGTGT VFNDEMESIA FNRLSLQDKP LNSLKGYFGH TLGAAGVIET
AVCMQMMRNG MLIKSLGYRD AGTSMPLNII QENEPRTLRT ILKTASGFGG GNASLMIRNL