Gene Dfer_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1970 
Symbol 
ID8225542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2406448 
End bp2407230 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID644929807 
Productprotein of unknown function DUF1080 
Protein accessionYP_003086358 
Protein GI255035737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.46172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC ATTTCTCGAA ACTGAAAAGC ATTTTCCTCG GCCAGGCGAT CGCCATCGCA 
TGCATAGGCG TCACTTACGC GCAGGTAGGC GTAGGTGTGA AGGCGCCGAA AGGAGCCGAA
GTATACCTGG ACGGCAGCCG CAAAATGCTC GACGACAAAT GGATTTACTG GGAAGGACCA
CGTTTCGCGG CCAAGCCTCC GATTAAATGG ACCGTCGTGA ACGACCCGGT CGATAAGGGA
ACGGTCATTA ATGCCAACGA CCCGGCTTCT GCCGGCGGAC TGTACGGCGC GGCGGATATT
GTAACCAAAA AGCAATTCAA GGATTTCCGC GCCCACGTGG AATTCCTGAT CACGAAACCG
GGTGGTAACA GCGGCGTTTA CCTTCAAAAC CGCTACGAAA TCCAGGTGCT CGATGGTGAC
ACCACCTCGC ACGGCATGGC CGCGGTGATC AACGAATCCA AATCACCTTA CTATGCTTAC
AATGGCGTTG GCAAGTGGAA TTCGTACGAC ATTCTGTTCC GCGCGGCGCG GTTTAAGGAC
GGCAAACTGG TGGAACAGCC GATGGTGACT TTGTATTTCA ATGGCAAGAA AGTGCATACC
AACCAGAAAA TCAGCCAGGT GTGGGGCGGT AAAAACTCCG GCATCGATGG CGGTAACGAC
GGCGGCAAGG GCATTACCGA CACGCCCGGC GGCCTGAAAC TGCAATCGGA AGGCCATGAT
GTGTATTTCC GAAATATCTG GATCAAGGAA ATGGAGCTGG ACAGGCCTGA CACCGACTTT
TGA
 
Protein sequence
MKQHFSKLKS IFLGQAIAIA CIGVTYAQVG VGVKAPKGAE VYLDGSRKML DDKWIYWEGP 
RFAAKPPIKW TVVNDPVDKG TVINANDPAS AGGLYGAADI VTKKQFKDFR AHVEFLITKP
GGNSGVYLQN RYEIQVLDGD TTSHGMAAVI NESKSPYYAY NGVGKWNSYD ILFRAARFKD
GKLVEQPMVT LYFNGKKVHT NQKISQVWGG KNSGIDGGND GGKGITDTPG GLKLQSEGHD
VYFRNIWIKE MELDRPDTDF