| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1905 |
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| Symbol | |
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| ID | 8225476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2341854 |
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| End bp | 2345066 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644929752 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086304 |
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| Protein GI | 255035683 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGG AAATATTACT ACATCTTTTT CACCGGAAGC CCTGTTTATT ATTTTTATTG
ATTTGCTTTT GTATACCTGC TGCATTCTCT CAAACGGCAG TTCGGGTTTC GGGGAAAATT
GTTGACGAAA AAAACGAAGC GCTGCCGGGA GTGAATATTC AGGTGAAAGG GACCACTACC
GGCGCAAGCA CGGATGCGGA CGGAAATTAC ACCGTAAGCG CCGCCCCCGG ATCTTCCCTG
ATATTCTCTT TTATAGGTTA CCAGAGTCAG GAAATACCGA TAGGCAATAG CTCGGAGGTG
AATGTGACAT TGAAGGCAGA CGTGGCGGTG TTGCAGGAAG TGCTGGTGAC GGGATACGGT
GTGCAGTCGA GGGAAACGCT CACCACGTCT ATCTCAAAAC TCGACACGAA GGTGCTTGAA
AATGTTCCTT TTGCCAATGC CGCCTCGGCT TTGCAGGGAA CCGTTTCCGG CGTGCGGGTC
CAAAGTACGT CCGGCCAGCC CGGTGCGGCT CCGCGCGTGA TCGTACGGGG CGGAACCTCT
ATCAATAATC CCAACGGGGC CAGTCCGCTA TATATCATCG ACGGGGTGAT CCGGACTGAT
ATGAATGATA TTAATTCGGA TGACATCGCT TCCATGCAGG TGTTAAAAGA TGCGGCTTCC
ACCGCCATTT ATGGGGCCAG GGGATCCAAC GGGGTAGTTA TCATCACCAC CAAAACAGGC
AAGTCCGGGC AGACGAGGGT CAGTTATTCT TATGACATGA CTACATCCAA GCCTGGTAAA
ATGTTCGAGC TTGCCAATGC TCGGGATTAT CTGACCATCA ACAGGCTAGG GGTTTTTGGG
GATGCGAAGT TCGGAGATTA TACTTCAAGG CTGACCTTGC CTATGGGTTA CGGAACAGGG
AATGACCTGA CCAATAACAC CGCATTTACA ACCCAATACC TGACGCCTGC GAACGAACAT
AAATTGCAGG AAGGCTGGCA GAGCATGCCG GATCCGGCGG ATCCTACCAA AACACTGATC
TTCCAGGACA CCGATTTTCA AGCATTAAAC TACCAGACGG GCATTTCCCA TAACCATAAC
CTGTCCGTTT CCGGCGGTAC TGAAAAAGGA TCATTTAATG CAGGGGTAGG GTATATGACT
GCCGACGGGA CTGTAATTAC CACGAAATAT GACCGCCTCA GCTTTAATCT GAACGGGGAT
ATCCAGGTAA AGAAAAACCT CACTGTGTTT TCAAAGGTGA TTTTTTCAAG GTCTTCAACG
AACACCCCCT ACGGTTCCAC CGCAGTTACT TTCTACCGAA ACGCCGGCCT GGCGCCGACG
GCCAAATACA GGTTTGAGGA CGGTACTTTG GCTCCCGGTA CCAACAATGG TATCGGAAAC
CCGGAATACC AGATGAATAC CAGGAAGGCC GAGAACTCAA ATGAAAAGCT GACGGTGACG
CTGGGTTCGC GCTGGAATAT CCTGCCGGGT TTATCGTTTG AACCGCAGGT ATCACTCTAC
AATGTCAATG GAGACGGATA TACGTTTCAG CCGGGATTCT GGAACGGGCC GGTTGCGTTT
GTGGATGCAC GTGCAGCCTC TGCTACCAGC AGCAGGTGGC GCCAAACCCA GGCGGACGGT
GTTTTTGCAT ACACCAAGTC ATTCAAGGAC CATAACCTCG ACGCAAGGGC AGGGATATCC
TATTTCGGAC GTACCACGTC CAGTCTGAGC GCCAGCGGCA GAGGGGCCTC GACCGACCTG
ATCCCGACCC TGAATGCTTC TGCAGAAGCA ACCGCAGTCA GCAGTTCAAT CAGCGAACAG
CGTATACTGG GGTATTTCGC GAGTGCGAAT TACAATTATC AGATGAAGTA CCTGCTGAGC
TTGAATATGC GCTACGATGG TGCTTCCAAT TTGGGCGAGT CGCACAAGTG GGGCTTTTTC
CCAGGGGTTT CCTTAGGCTG GAATATGCAC AAGGAAGATT TTTGGGCCGG AATCTCCCGC
GGCGTTTCTC AAATGAAACT GAGAGGGAGT TATGGTGAAA ACGGAAATAT CAGCGGATTG
GGGGATTTTA CAGCTCAGGG CGCTTACGGC GTGGGATCCA GATACGGAGG AGCTGCCGCA
ATCCAGAATA CCGTGATTCC GAATAAGGAT TTGAAATGGG AACAGTCCAG GACTTTCGAC
ATAGGTGCGG ACCTCGGTTT CCTGGACAAC CGGCTTACCC TGATCGTGGA CTATTACCGG
CGCGTCACCA GCAACCTGCT GACAAGCCTT CCCTTGCCGC AGTCTACCGG GTTTGCCAGC
GTGCTTACCA ACCTGGGCAC ACTTGAAAAC AAGGGTTTTG AGATTGAGCT CGGCGCGCGT
GTACTTTCCG CTAATTCTCC CTTGCAGTGG AATGTGGCTT TCAATGCCTC CAAAACAAAG
AATAAGGTTT TGAAATTGCC CAATAATGGG GTAGAAAACA ACCGTGTCGG CGGTCTGCTG
GTGTGGGACG ATGCCCGGCA GGATTATGCC TGGAAAGGCG GAATTCAGGA GGGCCACAGG
CTGGGGGAAA TGTACGATAG AAAACAAGTG CGCATTTATC CCACCGATGA AGATGCGAAA
AACGGTCCGA TCGCTTCGTA CATCGTAGGT GCGGATAAAA CCCAGTACGG GGGAGACGTT
GAATATTACG ATGCGGACAA AAACGGCATT ATCGATTCGA GGGACAAAAG GTATATGGGA
AATGCCTATC CCCTGTGGAC GGGAGGGTTC TCAAATACAT TGAGCTACAA GAGTTTCAAT
TTGTATGTGC GGCTTGATTA TACCACCGGC CACACGATCT TCAACTGGGG CAGGATGTTC
CTGGACGGAA ATATGTATTC CGACGGCAAC CTGACTCAGC GAATGGTAGA GCGCTCCTGG
AAAAAGCAGG GCGATATTAC CGATATGCCC AGGTCGTATT GGGGCGGAGA GCGGGTTCAG
CGTAACCTGT TCGATGGCGT CACCACCTCA GGCAACTCGA TGTACAACGA GTCCGGCGAC
TTTCTGGCCA TTCGGGAGGT GACGCTGAGC TACTCCGTAC CGTCGCGGAT ATTGAACAAG
CTGAAACTGG CCAGTTTGAG ATTCAACGTA ACCGCCAACA ACATTCACTA CTTCACCAAA
TACCTCGGCC TGAACCCGGA AGAGGGCGGC GTCGACGATG GCCGTTATGC AATGCCTAAA
AACATCATTT TCGGAGCCAA TATTTCATTT TGA
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| Protein sequence | MQKEILLHLF HRKPCLLFLL ICFCIPAAFS QTAVRVSGKI VDEKNEALPG VNIQVKGTTT
GASTDADGNY TVSAAPGSSL IFSFIGYQSQ EIPIGNSSEV NVTLKADVAV LQEVLVTGYG
VQSRETLTTS ISKLDTKVLE NVPFANAASA LQGTVSGVRV QSTSGQPGAA PRVIVRGGTS
INNPNGASPL YIIDGVIRTD MNDINSDDIA SMQVLKDAAS TAIYGARGSN GVVIITTKTG
KSGQTRVSYS YDMTTSKPGK MFELANARDY LTINRLGVFG DAKFGDYTSR LTLPMGYGTG
NDLTNNTAFT TQYLTPANEH KLQEGWQSMP DPADPTKTLI FQDTDFQALN YQTGISHNHN
LSVSGGTEKG SFNAGVGYMT ADGTVITTKY DRLSFNLNGD IQVKKNLTVF SKVIFSRSST
NTPYGSTAVT FYRNAGLAPT AKYRFEDGTL APGTNNGIGN PEYQMNTRKA ENSNEKLTVT
LGSRWNILPG LSFEPQVSLY NVNGDGYTFQ PGFWNGPVAF VDARAASATS SRWRQTQADG
VFAYTKSFKD HNLDARAGIS YFGRTTSSLS ASGRGASTDL IPTLNASAEA TAVSSSISEQ
RILGYFASAN YNYQMKYLLS LNMRYDGASN LGESHKWGFF PGVSLGWNMH KEDFWAGISR
GVSQMKLRGS YGENGNISGL GDFTAQGAYG VGSRYGGAAA IQNTVIPNKD LKWEQSRTFD
IGADLGFLDN RLTLIVDYYR RVTSNLLTSL PLPQSTGFAS VLTNLGTLEN KGFEIELGAR
VLSANSPLQW NVAFNASKTK NKVLKLPNNG VENNRVGGLL VWDDARQDYA WKGGIQEGHR
LGEMYDRKQV RIYPTDEDAK NGPIASYIVG ADKTQYGGDV EYYDADKNGI IDSRDKRYMG
NAYPLWTGGF SNTLSYKSFN LYVRLDYTTG HTIFNWGRMF LDGNMYSDGN LTQRMVERSW
KKQGDITDMP RSYWGGERVQ RNLFDGVTTS GNSMYNESGD FLAIREVTLS YSVPSRILNK
LKLASLRFNV TANNIHYFTK YLGLNPEEGG VDDGRYAMPK NIIFGANISF
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