Gene Dfer_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1872 
Symbol 
ID8225443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2311408 
End bp2311770 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content46% 
IMG OID644929721 
ProductLuxR family transcriptional regulator 
Protein accessionYP_003086273 
Protein GI255035652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.633218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAA CCAACCAAAA AGCATTAAAA GAAGCGTTCC GGCAGAAGAA ATTCAGGATA 
GGCGTGTTTC AACTTCGCAA CCTGACCAAT CAGAAGATCC TCATTGGAAG CAATGTAAAC
CTGGATGCGT ACTGGAACAG AATGCGAAGC GAGCTAAAAT TGGGCGCGTT TCGAAATGCT
GAGTTGCAAC AGGAATGGAA TGAGTTCGGT GAGACGAGCT TTGCATTTGA AATACTGGCT
GAAATTCAGC AGGACGAATC GCAAGCACGC AACTACGCCC GCGAAGCAAA AGAGCTTGAA
AAGCTGCACG TCGACGAGCT TCAACCATTT GGTGAGCGCG GGTATCATTT CAAAAAAATT
TAG
 
Protein sequence
MTSTNQKALK EAFRQKKFRI GVFQLRNLTN QKILIGSNVN LDAYWNRMRS ELKLGAFRNA 
ELQQEWNEFG ETSFAFEILA EIQQDESQAR NYAREAKELE KLHVDELQPF GERGYHFKKI