Gene Dfer_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1828 
Symbol 
ID8225399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2251331 
End bp2251723 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content46% 
IMG OID644929678 
Productresponse regulator receiver protein 
Protein accessionYP_003086230 
Protein GI255035609 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000105938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAACA ACACGCTTTT GGTAGTGATC GACGACGATA CGGACGATCA GGAAATTTTT 
AAAATGGCTG TCGAAGATTT AGATGAGCCA ATCGACTGCC TGTACTTTAC TGATTGTGAA
TCTGCCATTG CCCACTTTTC CCAACCTCAG GCGACAACTC CCTCATGGAT TTTCATTGAC
CTGAAACTGC CACGAGTGGA TGGTGAGCAA TGCCTGGCGC AATTGCAGCA GCTGCGCCAG
TTCGATCATC CGTTTATGGT CGTTTTCTCT TCATCGATCC CTGACAATTT GCGGGAAAAA
CTTTCAAATT CGGGTGTGGA CAAAGTGATA CCAAAGACGA GTTCCATACC GGAGCTTGCA
AATCAGATCC AGCAGGTGGT TAAAATGCAT TAG
 
Protein sequence
MGNNTLLVVI DDDTDDQEIF KMAVEDLDEP IDCLYFTDCE SAIAHFSQPQ ATTPSWIFID 
LKLPRVDGEQ CLAQLQQLRQ FDHPFMVVFS SSIPDNLREK LSNSGVDKVI PKTSSIPELA
NQIQQVVKMH