| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1812 |
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| Symbol | |
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| ID | 8225383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2229902 |
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| End bp | 2230996 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929664 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003086216 |
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| Protein GI | 255035595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCAT CAAACCTTTC TCTGAAAACG CTCGCGGCCG TTTCGCTGCT GGTTACCTCC
TGCTACCAGC CCAAAGCGCC GGTGGTGGAG GAAAAACAGC CCGTCGCATT CCTGCCGTCC
AACGTAGCCA CCTATCCCGC TGTAATCGAG CCCGTTACCG AGTCGATCCG GCTTACCGGC
CAAATCGAAT ACAATCCCAA CCAGGTGGTG CATTACACCA GCCTGGTGAC GGGCGTCATT
ACCCGCTCGC ACGTGTCGCT GGGCGACCGC GTCACCAAAG GACAGGTGCT GGCCGAAATG
CGGAGCACCG AACTCTCCGA GCTTAGCTCG CAGCGCCGGG TGCTCGACTC GCAGCTTGCC
GTAGCCCAGC GCAAGCTCGC CGCCGCGCAG TCGATGTTCG ACGACCGCAT TGCTTCCGAA
AAAGACCTGG CGGAGGCGAA GAGCGAAGTG GAAGTGGTGC GGTCGGAAAT CGACAAAATC
GCAGCCAATC TCTCGCTTTA CAATGCCAGC TCCGAAAAAG GCGTATTCCA GATCAAAGCG
CCGGTGAGCG GCTATGTGGT GGAAAACAAT GTGTCGGAAG GCACGCAGGT AGGCAGCAGC
GAGTCGGGCC TGTTCACGAT TTCGGACTTG TCGGAAGTGT GGGTAACGGC CAATATTTAC
GCCGTCGACC TGTCGTTCGT CACCAAAGGC ATGAAGGCCA TTATCAAATC CAAAGCCTAC
CCCGGTGAGT TTTTTGAAGG CACCATCTCC GATATTTCGC AGGTATTCGA CCCGCAGGAA
CGCGTGCTCA AAGCGCGGAT CAGGATGCCG AACAAGGACC TCAAACTGAA ACCGGGGCTG
ACGATCGAGG CCGTGGTAAC ACGTCATTCC AGCGAAATGG CGGTAGGAAT ACCAGCCAAT
GCCCTGATCC TGCACAATAA TGAAAACTAC GTCCTGATCC GGAAGGAAGA CAATTCCCTA
GAACCCAGAA AGGTAACGCC GGACGCCACC GACAACGACC GGATCTTTTT TAAAAGCGGC
ATTGCAGCCG GCGAGCACGT GGTCGTGCGC GACCAGCTCC TGCTGTTTTC GCAAGTTCTG
GACACGGAAA AATAA
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| Protein sequence | MFPSNLSLKT LAAVSLLVTS CYQPKAPVVE EKQPVAFLPS NVATYPAVIE PVTESIRLTG
QIEYNPNQVV HYTSLVTGVI TRSHVSLGDR VTKGQVLAEM RSTELSELSS QRRVLDSQLA
VAQRKLAAAQ SMFDDRIASE KDLAEAKSEV EVVRSEIDKI AANLSLYNAS SEKGVFQIKA
PVSGYVVENN VSEGTQVGSS ESGLFTISDL SEVWVTANIY AVDLSFVTKG MKAIIKSKAY
PGEFFEGTIS DISQVFDPQE RVLKARIRMP NKDLKLKPGL TIEAVVTRHS SEMAVGIPAN
ALILHNNENY VLIRKEDNSL EPRKVTPDAT DNDRIFFKSG IAAGEHVVVR DQLLLFSQVL
DTEK
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