| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1773 |
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| Symbol | |
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| ID | 8225344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2176601 |
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| End bp | 2179642 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929627 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086179 |
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| Protein GI | 255035558 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.27129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTG CTGCGGCATT CGCCGTACTC CTGTTTTTCC AATCCGCTTT CGCCTGCGCC
CTGGGCACAT TAACCGGAAA AATTTCCGAC GAGAAAGGAG AAGGCATTCC TGGCGTCAGC
ATTTTGCTCA AAGGTTCCGG GAAAGGCACT TCCACGCTGG CAGATGGCAC ATTCTCATTG
GACGGTGTGG ATGAAGGTTC CGTTTTAACT ATTTCCTTCG TCGGGTACGT TACCCAAGAG
GTGACAGTGG GCAACCGGAC CACGCTCGAC GTAACGCTCG TTTCCGATCA GAAGCTGCTG
AATGAGCTCG TCGTGGTCGG CTACGGCGAA CAGAAAAAGG TGAATGTGAT CGGCTCCGTG
TCGCAGATCG ACTCGGACGC GCTGGAAAAC CGGCCCGTCA CGCAGATAAG CCAGGCCATC
ACCGGACAAA TGCCCGGCGT AACCGTCACG ACCGGCTCCG GCCGGCCAGG CGCGAACGGA
GGCACGATCC GCGTCCGGGG CGTAGGCTCG TTTGGTGCCA CGCCCGACGC GCTGATCCTC
GTGGATGGTA TCCCAAGCAC GCTCAACGAC ATCAGTCCGG ATGATATCCA ATCCATTTCG
GTATTGAAAG ATGCCTCATC CGCAGCCATT TACGGTGCAC GATCGGCAAA CGGGGTGATC
CTTGTTACCA CCAAAAACGG CGGTTCGGGC AAAGCAACGG TGAGCTACAA TGGCTACGTG
GGTTTCAACG AACCGACACA GCTGCCCGAC TTCGTCAACT CCTGGGAGTA TGCGGAAATG
TTCAATATCG CTTCCGGCAC CACGGCCTAT TCAGCCGAGG ACATTGCCAA ATTCCGCTCG
CAAGCCGACC CCGATAATTT TCCCAATACC AAATTCCTGG ACATGCTTTT CTCGGAAAAA
GGCATTCAGA CCGGCCACAC GATCAACATC AACGGCGGCA ATGAACGGGC TAAATACTTC
ATCTCGGGCG GCTACATCAG CCAGGACGGG ATTGTGCCCA AAAACAATTT CAAACGTTAC
AATGTGCGCC TGAACCTTGA AAACGACCTG GGCAGGAACT TCAAGCTCAC AACCCGCATC
GGGGCCTCGT CACAGCTGCG CAAGGAACCG CAGGCGACCG GCAACAAAGG CGGAGAGCTC
ACCGACCAGC TCATCCAGAA TGCCGTCAGG TACCCGGCGG TTTTCCTCGG CCAGGCTTCC
AACGGCGATT TTGGGATCGG CCCCGAAAGC GGCGGCACGC CCGTGTCGTG GATCGCATCG
TCGTCCTATT TCCGCAATCC GCAAAACCGG CTGACTACCA ACATGAAACT GAACTGGCAA
CCCATTCCCG GCCTGAACTT GTCGGCGATC GGCGGCTATA ATTTCGCATT GCTGGAACGC
GTATCCTACA ATGCATCGCA GCGGCTGAGC CCGACGGTCA ATCTGGCGCA GTCGATGTTA
AACCAGGACC GTAACAAAGA GATTTATAAG ACCTTGCAGT TTATAGGCGA GTATTCCAAA
AGTTTTGGCA AAAACACGAT CGATTTCCTG CTCGGCTATT CCTTTGAGAA TGAGCTGAGC
GACTACATGT CGGGCTACCG CCAGGGTTTT CCCAGCAACG ACTACACGGC CATCGATATG
GGCGGCGCCG ACAACCAGCA GGTCAACGGA TACGACGAAC AATGGGCGAT CCAGTCGTAC
TTCGGGCGCT TGCGGGTCAA CAGGGAGGAC AAATACCTTT TTGAAACGAC CCTCCGCTAC
GACGGTTCTT CGCGCTTCCC CGACAACAAC AAATATGCCG TTTTCCCGTC TGCAGCGGCC
GGCTGGCGCA TTTCGGAAGA GCAATTCCTG AAAGGCGTTT CCTGGCTCTC GAACCTGAAA
TTGAAAGCTT CATGGGGGAT ATTGGGGAAT CAGAACATTG GTAACTACCC TTACCAGACC
GTGCTCAACT CGGGTGCCAA CTATCCGTTC GGAAATGGCA TTACTACCGG TGCCTCCTAC
TCTGTTTACC GGGATGCCAA CATCAAATGG GAGTCGACAA GGACCACTGA TGTGGGTATC
GAAACGGAAT TCTTCAACCG GAAACTGGGC TTTAATGCCA CATATTTCCA GCGCAATACC
ACGGATATTC TGTTCAAGCC GTCGGCGAGC GTTTCGTCTG TTCTGGGCGT GACGATCAGC
GAAACCAACA CCGGCGAGGC ACAAAACAAA GGTTGGGAGT TTGACGGTTT TTACCGTGAT
CGCGTCGGCA AGCTGAACTA CTCACTCAGC GGAAATTTTT CGATTATACA AAACAAGGTG
GTGTCGCTGG GCCTTGGCAA TGTCCGCCAG CCTAATGGAC TGGTCGGAAA CGGCTCCACG
CTGTTCAACG GCTTCCCGAT GGAAATGTAC TACGGCTACC TGTCCGACGG CGTGTTCCTC
GACCAGGCCG ACATCGACGC CTGGCCCAAC CAATCTACCA TTACTCCCGG CGCCCGCCCC
GGCGACCTTC GCTACAAGGA TATCAGCGGC CCCAACGGTG TCCCCGACGG CAAAGTGGAT
GCCACTTACG ACCGTACTTA CCTTGGCAGC CGCATTCCCA AATACACTTA CAGCTTCAAT
GCGGACCTGC GCTACAAGGC GTTCGACTTT TCGCTCTTCT TGCAGGGCGC AGCCGGCGTA
CAGGGTCAGC TGAACAATTA CGCGGGTGTG GCGTTCTTCA ACCTGGGCAA TATCCAGCGC
TGGCAAATGG AAGGCCGCTT CGACCCGAAC AATCCGCAGC GCTACCCCGA ATATCCCCGC
CTGGAAGTGG TCACGAACAG CGGCACGCCT AACACCGTAC AGTCGGATTT CTGGGTGCAG
AATGCGGCTT ACCTGCGCGT GAAGAACGTG CAGCTGGGCT ACTCGCTGCC AGCTTCCGCA
TTGAACAAGC TGAGAATCGA CCGCCTTCGG CTGTACGTGA GTATCGAAAA TCCGCTCACA
TTCAGCGGCT TCCGCGAAGG CTGGGACCCG GAAATCAACA CGAGCGGCCC CTATTACCCT
ATTCTTTCCA CTTACACTTT TGGTGTCAAT ATCAAATTCT GA
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| Protein sequence | MLAAAAFAVL LFFQSAFACA LGTLTGKISD EKGEGIPGVS ILLKGSGKGT STLADGTFSL
DGVDEGSVLT ISFVGYVTQE VTVGNRTTLD VTLVSDQKLL NELVVVGYGE QKKVNVIGSV
SQIDSDALEN RPVTQISQAI TGQMPGVTVT TGSGRPGANG GTIRVRGVGS FGATPDALIL
VDGIPSTLND ISPDDIQSIS VLKDASSAAI YGARSANGVI LVTTKNGGSG KATVSYNGYV
GFNEPTQLPD FVNSWEYAEM FNIASGTTAY SAEDIAKFRS QADPDNFPNT KFLDMLFSEK
GIQTGHTINI NGGNERAKYF ISGGYISQDG IVPKNNFKRY NVRLNLENDL GRNFKLTTRI
GASSQLRKEP QATGNKGGEL TDQLIQNAVR YPAVFLGQAS NGDFGIGPES GGTPVSWIAS
SSYFRNPQNR LTTNMKLNWQ PIPGLNLSAI GGYNFALLER VSYNASQRLS PTVNLAQSML
NQDRNKEIYK TLQFIGEYSK SFGKNTIDFL LGYSFENELS DYMSGYRQGF PSNDYTAIDM
GGADNQQVNG YDEQWAIQSY FGRLRVNRED KYLFETTLRY DGSSRFPDNN KYAVFPSAAA
GWRISEEQFL KGVSWLSNLK LKASWGILGN QNIGNYPYQT VLNSGANYPF GNGITTGASY
SVYRDANIKW ESTRTTDVGI ETEFFNRKLG FNATYFQRNT TDILFKPSAS VSSVLGVTIS
ETNTGEAQNK GWEFDGFYRD RVGKLNYSLS GNFSIIQNKV VSLGLGNVRQ PNGLVGNGST
LFNGFPMEMY YGYLSDGVFL DQADIDAWPN QSTITPGARP GDLRYKDISG PNGVPDGKVD
ATYDRTYLGS RIPKYTYSFN ADLRYKAFDF SLFLQGAAGV QGQLNNYAGV AFFNLGNIQR
WQMEGRFDPN NPQRYPEYPR LEVVTNSGTP NTVQSDFWVQ NAAYLRVKNV QLGYSLPASA
LNKLRIDRLR LYVSIENPLT FSGFREGWDP EINTSGPYYP ILSTYTFGVN IKF
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