Gene Dfer_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1705 
Symbol 
ID8225276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2078246 
End bp2079070 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content58% 
IMG OID644929559 
Productketose-bisphosphate aldolase 
Protein accessionYP_003086111 
Protein GI255035490 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AAGATAAACT AAGGCAACTG ACGCAGCTCA AAAAAGGCTT GCTGGCCACC 
AATTACTACG ACCTGGAAAC CCTTCACGGC GTGTTGCAGG CGGCTGCGGA CATGAAGCAG
CCGCTGATCC TCCAACTAAC GCAAAGCTCG ATCGACTATA TGGGCCTGAA AACGGCCGTC
AACCTGGGAC GCAACGGCCT GGAAGAGTTC GGCGTGGAAG GATGGATACA CCTCGACCAC
GGCGGCTCGG TGGAGCTGGT GCAGCGCTGC CTCGACGCGG GCTTCGACTC GGTGATGATC
GACGGCAGCG AGCTGTCGTT CGAAGAGAAT GTGCGCCTCA CCCGCGAGGT CGTCGAGCGT
GCCAAACGGT ATGATGTACA CGTAGAAGCG GAGCTCGGGT ATGTAGCCAA ACTGGGCCAG
TCGCACGAGA GTACCGGCTT CACCCAGCCC GACGAAGCGG CGGCGTTTGT AGAAGAAACG
GGCGTGGACG CATTAGCGGT GGCGATCGGC ACGGCGCATG GCTTCTACAA GCAGGAACCG
AAGCTGGACA TCGACCTGCT CCGGCGTATT GCCGAAAAAA CAGCCGCTAC CCTCGTGCTG
CACGGCAGCT CGGGCGTCCC GCACGACCAG GTGCAGCGCG CTATTTCAAA CGGCATCTGC
AAGGTGAACC TGGCGACCGA GATCAAGAAC ATTTTCATGG CTTCCCTCAA AAACGAACTC
ACCTATAACG AGGATATCGA CCTCCGGAAG GTGTTCCCGA GAGCCACCTG CAAAATCACC
GAACTGGTGA AAGCCAAGCT TGAAATGGTA GAGAACGTGG CATAA
 
Protein sequence
MKLKDKLRQL TQLKKGLLAT NYYDLETLHG VLQAAADMKQ PLILQLTQSS IDYMGLKTAV 
NLGRNGLEEF GVEGWIHLDH GGSVELVQRC LDAGFDSVMI DGSELSFEEN VRLTREVVER
AKRYDVHVEA ELGYVAKLGQ SHESTGFTQP DEAAAFVEET GVDALAVAIG TAHGFYKQEP
KLDIDLLRRI AEKTAATLVL HGSSGVPHDQ VQRAISNGIC KVNLATEIKN IFMASLKNEL
TYNEDIDLRK VFPRATCKIT ELVKAKLEMV ENVA