| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1700 |
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| Symbol | |
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| ID | 8225271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2068885 |
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| End bp | 2071059 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929554 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003086106 |
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| Protein GI | 255035485 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0653279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGA ATCCAAAACA GAAAGCATTA ATCCCAACAT TGCGCCTGAA CTCGCTGCTG
GTCGGGTTTC TGCTGATGGC CGGTATGCCG GCCATCGCAG AAACCATCCA TCGCAAGGCC
AGGGCCACGC TCACGCCCGT CGAAATGAAC AAGGAGGATA CCTTGAAATT CACGCTCGCG
AACGGCAAGG TCAGAACGAT GGTGTTGAAG GAAATTTCCT CCGATATCAT CATCACTAAC
CTCGGCAAGC TCCGGGCGGA CCAGCCCGGC GGCGCTACGC TCTACCATTT CACCTGCCAG
GTGCTGGTAG ACGGCCATTT TATGAAAATG GAACGCTACG TCGGGTCGCA GGAAAGCTTT
TTCGAGCCGT ACGTCATCAA TGGCATGCGG GTGTGGTTCG ATGGCGTGAA TACGATCGGG
CAGATCATCA AGGACGAACA CGGCGGCAAA AGCAGCGAGT CGGTCCCGAA AAAGCACGCC
CGGTTTGCGG TGACGGACAT GACCATGCGG ATCGCGCCTT CGCGCTTGTA CCCCATGTTC
CCCATGACCG AAAACCAGCT ACGCATTTCG GACAGCTACA ATGGCGACGA TTGCTGGATG
GGTGCTTACG ATGGATTTGA GCTGCACGGC GGCCTCGACC TGAACAAGCC GGCCGGGACG
CCGCATTTCA CGCCGTTCCC GATCGACGAC CATTATTTTG TTTTCAGTCT CGATAAGGGC
GATAACAACA ACCGCTGGCG GGGCATTCAC ACCTGGGAAA ACGGCGACCG GTGGAGCATT
CAAAACCACC ACATGCTAAA TCTCCGCGTG CCGGAACATA CGCCTATCAA GGCAGGTGCA
TATTATTCCG ACGGCTCCGG GGTGCACGTG GGCGATCACA ATCATTCGCA TTTTGTATTC
CGGGTCAAAA CAAAGGAGAG CGACACGGAG ATTTTGCTTG ACCCGTGGAT ACTCTTCTGG
CAGACATTCG AAGATAACCG CGAACGCGCC GGGGAGACGA AGGCAATCGC CGCGCCGTCC
AGCCCGGGCA AAACGGGCCA GCAGCTGGCA TTCAACGGAG AAAAGTCGCG GAATGCGTAC
CGAGGCTCCG GCCGCGAGCT GCTTTATTAC TGGACGTTCG GCGACGGCGG CATTTCCATC
GACAAGAACC CGAAACACGT TTTTACCAAA CCGGGCATTT ACCCGGTAAC GCTCCTGGTG
GACGATGGCG TGTCGCGGAG CAGCATCACG CAGCATATCA CGATCGACGG CGAGGGCCAG
AAACCTTCGG CAAACGCTTC GCTCGCATTG GCCTCCGACG ACGACCCGTC ATTCCGCATC
CGGCCCGCGC ATATCATGGA CGTGTATGCA ACCGGGCGAG CGCTCATTCC GAATACCATG
CATTTCCTTG CCCGCGAAAC CAGGCCGCAG CCCGAGGCGA AAACGGTGAT GCTGGTTAAT
GCAGGTGATG GTACTTTGGG TAAAATCAAT GTGCCGAAGG TGGAATACCT GCAAGGAAAA
GACTGGCTGA GCTTGCAATC GGAAGGGCAG GGGAATGATC AGAAAATACA AGTGTCGGTT
AACGGAAGTG GGCTGCTTCC CGGCGTGTAT GCTGCGCGCG TGCGGGTGGA GGCGCCGGGC
AGCCTGAATG CGGTGCAGTC CTTCACCGTA AACCTCACAA TCCCCACTTA CCCGCCGGCA
CACAACGAAA CCGGCAACCT GAAACGCGAG ATCGTGGACA ATGCGGATGC GCGCGAAAGC
CGGTTTTACT GCACGCCCTA TTTCTGGGTG GGGCCGCAGT TTAAGCGATG GAAAGAAAAA
GGCTTCCGGG ATATGTACCT CACCAATGGC AGCCGGGCCG CGGCAGGGGA GTTTGCCCGC
TTCCGGCCGG ACCTCGCGGC GGGTACCTAC GAGGTGGCTT TTTCGGAACA AACACCTTTC
GACCCGCAAC GCCGGGCAAC GGTGGGCGAA AAGAAACACC CGGTCGACGG CCGGTTGAAT
GCTGTGCCGC GGTTTAAAGT GCGGGTCCAT TCCAAAAATG GGACCGAGGA AATATGGGTG
AAACCTACCG AATCGCTCTC CATCGGCAAG TTCGAGTTTT GGGAAGGAAT GGACGGCTAT
GTCGACATCC TGAGTGAAGG TTCGGAGGGA CAGGTGCTGG TAGACGCGAT CATTTTCCGG
AAAGCAGCGC AATAA
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| Protein sequence | MNMNPKQKAL IPTLRLNSLL VGFLLMAGMP AIAETIHRKA RATLTPVEMN KEDTLKFTLA
NGKVRTMVLK EISSDIIITN LGKLRADQPG GATLYHFTCQ VLVDGHFMKM ERYVGSQESF
FEPYVINGMR VWFDGVNTIG QIIKDEHGGK SSESVPKKHA RFAVTDMTMR IAPSRLYPMF
PMTENQLRIS DSYNGDDCWM GAYDGFELHG GLDLNKPAGT PHFTPFPIDD HYFVFSLDKG
DNNNRWRGIH TWENGDRWSI QNHHMLNLRV PEHTPIKAGA YYSDGSGVHV GDHNHSHFVF
RVKTKESDTE ILLDPWILFW QTFEDNRERA GETKAIAAPS SPGKTGQQLA FNGEKSRNAY
RGSGRELLYY WTFGDGGISI DKNPKHVFTK PGIYPVTLLV DDGVSRSSIT QHITIDGEGQ
KPSANASLAL ASDDDPSFRI RPAHIMDVYA TGRALIPNTM HFLARETRPQ PEAKTVMLVN
AGDGTLGKIN VPKVEYLQGK DWLSLQSEGQ GNDQKIQVSV NGSGLLPGVY AARVRVEAPG
SLNAVQSFTV NLTIPTYPPA HNETGNLKRE IVDNADARES RFYCTPYFWV GPQFKRWKEK
GFRDMYLTNG SRAAAGEFAR FRPDLAAGTY EVAFSEQTPF DPQRRATVGE KKHPVDGRLN
AVPRFKVRVH SKNGTEEIWV KPTESLSIGK FEFWEGMDGY VDILSEGSEG QVLVDAIIFR
KAAQ
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