Gene Dfer_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1618 
Symbol 
ID8225189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1957633 
End bp1959060 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content55% 
IMG OID644929473 
Producthypothetical protein 
Protein accessionYP_003086025 
Protein GI255035404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.483238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.382765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA ACACCACCTA CCAGCGAAGG GGCGCCGCCA ACGGATTGCC CGCAAACCCC 
GCAACCACAT CCCGTGTGGC GACGCCCGGA GTGGACACTC CCGGCATATC CACGCGGGCA
TGGAGCCCGG CCGAAAAGCT GCTTTTCCGC GTGGCATTCA TCTATTTCGC GATCCAGAGC
ATTCCGCTGG ACTGGAAATA CTTCCGCCGC GTGTTCCGGA TCGACTGGCT GAACCTTACG
TACGGGGATA TTTTCGATCT GGCGCGCTAC CAGCCGCGCT TTTTCGGCGA GCACGACACA
TTCCTCAACT GGCTCGTGGT GCTGGTAATC GCCGTCGCCG GGGCTGTGGT GTGGGGCAAC
CGCGACAAGG ACCGGCGTGA TTACAGCCAG CTTTATTACT GGCTGCGCGT GATCGTCCGT
TACCGCCTTG CCGCCGGGCT TATCGCTTAT GGTTTTATCA AGTTTTACCC CTTGCAGGCG
CCGCTGCCGT CGATCAGCAA CCTCAACACG GCCTATGGCG ATCTGAGCGC TTGGAAAATC
TTTGCACTCA GCCTCGGCGT GGTGCCCGAT TATGAGTCGT TTCTCGGGCT GGTGGAACTG
GTGGGTGGCT TGCTTTTGCT CCACAGGAAA ACTACCACCA TCGCTACGCT CATTATCATT
CCATTTACCG GCAATGTGTT TTTCTCCAAT CTGGCCTACG AAGGCGGCGA GTATGTGTAC
AGTTTTTATC TGATCGTCCT TGCGCTGTTC CTGTTTGCAT TCGATGCCAA CCGGCTTTAC
CGTCTTTTTG CATTGGAAAA ACCCACGGCC CCGAACCTTT TCAAACCCGA TTTCAGCCAT
GCGCGGTTGA AATTCGGCCG CATTGCCCTG AAAGCGGCAT TCGTGCTGTT TTTTGTCGTG
GTTTATGGTT CGAAGGCATA CGCCGGTTAC CATTCCAATC CCTATCAATA CCCGACCAAA
CCGGGCCTCG CCGGAGCTGC CGGGCTTTAC AATGTGGAGC AGTTTGTCGT GAATGGCGAT
ACGCTGGCCT ATTCGGCATT GGACCCCGTG CGCTGGAAAG ATGTGGTTTT TGAAAAATGG
GCTACCATCA GTATCCGCTC GTCGCGGCCG CTCGTGATCG ACTCTACCAA TGTGGAGCAG
ATCCATTTCG ACGATGCCAA ACGCAACTTC GAGTTCGCCG GATCGGGCGG TCGGCATTAT
TACGGCTACG ATTTCGACGA GGCTTCGAAA ACGCTGACAC TGACCAATAA AGTGAATGCG
GCCGACCAGC TCGTGCTGCA TTACGTCCGT CCCGACAGCA CCACGATCCG GCTTTCAGGC
GTCGCCAATG GCCGCGATTC GTTGCAGGTG GTTTTGAAAA AAACCAATAA AAAATACCTG
TTCGAAGAAG TGAAAAAGGT TGGCCGGCGT GGCGAATTCA AACTATAA
 
Protein sequence
MAQNTTYQRR GAANGLPANP ATTSRVATPG VDTPGISTRA WSPAEKLLFR VAFIYFAIQS 
IPLDWKYFRR VFRIDWLNLT YGDIFDLARY QPRFFGEHDT FLNWLVVLVI AVAGAVVWGN
RDKDRRDYSQ LYYWLRVIVR YRLAAGLIAY GFIKFYPLQA PLPSISNLNT AYGDLSAWKI
FALSLGVVPD YESFLGLVEL VGGLLLLHRK TTTIATLIII PFTGNVFFSN LAYEGGEYVY
SFYLIVLALF LFAFDANRLY RLFALEKPTA PNLFKPDFSH ARLKFGRIAL KAAFVLFFVV
VYGSKAYAGY HSNPYQYPTK PGLAGAAGLY NVEQFVVNGD TLAYSALDPV RWKDVVFEKW
ATISIRSSRP LVIDSTNVEQ IHFDDAKRNF EFAGSGGRHY YGYDFDEASK TLTLTNKVNA
ADQLVLHYVR PDSTTIRLSG VANGRDSLQV VLKKTNKKYL FEEVKKVGRR GEFKL