| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1559 |
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| Symbol | |
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| ID | 8225130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1862711 |
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| End bp | 1864576 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929416 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_003085968 |
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| Protein GI | 255035347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0391079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC AATTCTTATC CGCGCTTTGT GTGAGCGCGA TGCTTTACGG CTGTGCCGGC
AGCAAACCCG GACCGGCCGC TTCCGGCGCA AATACCATGG ACGTTTCCAT CGACCTGGTG
AATGTCCAGT CCGACCGTGT GCGTGTGACG GTGACGCCAC CTGCACAATC CGAAGAAACA
GCCACTTATA ACTTCCCGAA AATCATCCCG GGCACGTACG CGATCGCCGA CTATGGCCGG
TATATCAGTA ATATTGAAGC ATTTGATAAA AAAGGAAAAC CCTTGCGCAT CACGCGCACC
GATTCCAACA CGGTGAGCAT TACGCCCGGC CGCAAACTGG CCCGTCTCTC CTACCTGGTG
GACGACACGT TCGACACAGA AAAGGAGAGC GATACATTTT CGGAAACCGG CAACACGATA
TTTTCGCCCG CAGGGACCAA TATCGACGCC GGAAAGCATT TCCTGCTTAA TATGGCCGGG
TTTGTCGGCT ATTTTTCAGG ACAAACCGAG ACGCCTTACC GCATCACCGT CAACCATCCC
GAAACACTCT ACGGCACCAC CGCGCTCGTG GACAGCGACG ACGATGCCCG CCGGGATGTG
TTCACGCTTG CCCGCTATCC CGATGTGATC GACAATCCCG TGATGTACGC TGCGCCCGAC
ACCTCGGCAT TCAAGGTCGA CGGCATGGAA GTGCTGATCG GCGTGTATTC GCCGCGCGGG
AATGTGCGCG CCTCCGCATT GCGCCCCGAC GTAGAAAAGA TGATGCGCGC CCAGAAAAAA
TTCCTGGGAA AGATCAATGA CACGCCGAAA TACGCGGTGT TGACCTACAT TTCCTCGGGC
GCGGCGAACG ATGCCAAAGG CATTGGGGCG TTGGAACACA ATGCATCCAC GACGGCAGTT
TTCCGGGACC CGATGAAAAG CAAGGACCTG ATCCACGTGA TCAGCCACGA GTTTTTTCAC
ACCCTCGCCC CGTTGAAAGT ACATTCGAAA GAAATCCATT ATTTCGATTT CAACAACCCG
AAAATGAGCC AGCATTTATG GTTCTACGAG GGTGTAACGG AGTATTTTTC CAATCTTTTC
CAGGTAAACC AGGGACTGAT CGGCGCCGAC GTATTCTACG ACCTCATGGC CAAGAAGGTA
GCGAACTCCC GCGATTACCA GGATGACCTG TCATTTACCG AAATGAGCCG CAATGTGCTC
GATCCGAAAA TCAAGCCGCA GTATCCGAAT GTGTACGAAA AAGGCGCGCT CATTGCGATG
TGCCTCGATA TTGTAATCCG CGAGCAAAGC AAAGGCCAGC GCGGGCTGCT TTGGCTGATG
GGCGAGCTGT CGGCGAAATT CGGGCCGCAA AAGCCGTTCG ACGACGCGGA GCTGATCCCA
GTCATCACAC AGATCGCCGG GCCGGAAGCC GGTGCATTTC TGGACAAGCA TGTGGTAGCC
GGCGAACCCA TTGTGTATGA AGACTTTCTG GCTAAGGTTG GACTCAAAAA AGAGCCCGTT
CCGTTTCCTG AACCGGTGGT ATTCATGCGC GACAGTGTGA TTTACATCAA GCCCGATCCC
TCGCGTACGC ACGTGCTCGC GGACATGCCC GACGACGCCA ACCAGTTTTA CAAGGCATTG
GGCATCCAGA ACAACGACGT ATTCCTCGAA TTCAATGGCG TGCCCATTGA CCCTACCAAC
CTGAGTTCCA TCGTGTTCCT CGGCTACGAC CTCGACGAGG GCAGCCCCAT TACCGTGAAA
GTAAAGCGCA ACGGCCAGGA CCTGGAGCTG AAAGGCGCGG TGAAACTGAA CTATGCCGAC
GGCGACGGTT TCCGCTTCCG CGACGAGTCC AAACAAAGCC TGAACCAGGC ATGGCTCAAA
AATTAG
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| Protein sequence | MKIQFLSALC VSAMLYGCAG SKPGPAASGA NTMDVSIDLV NVQSDRVRVT VTPPAQSEET
ATYNFPKIIP GTYAIADYGR YISNIEAFDK KGKPLRITRT DSNTVSITPG RKLARLSYLV
DDTFDTEKES DTFSETGNTI FSPAGTNIDA GKHFLLNMAG FVGYFSGQTE TPYRITVNHP
ETLYGTTALV DSDDDARRDV FTLARYPDVI DNPVMYAAPD TSAFKVDGME VLIGVYSPRG
NVRASALRPD VEKMMRAQKK FLGKINDTPK YAVLTYISSG AANDAKGIGA LEHNASTTAV
FRDPMKSKDL IHVISHEFFH TLAPLKVHSK EIHYFDFNNP KMSQHLWFYE GVTEYFSNLF
QVNQGLIGAD VFYDLMAKKV ANSRDYQDDL SFTEMSRNVL DPKIKPQYPN VYEKGALIAM
CLDIVIREQS KGQRGLLWLM GELSAKFGPQ KPFDDAELIP VITQIAGPEA GAFLDKHVVA
GEPIVYEDFL AKVGLKKEPV PFPEPVVFMR DSVIYIKPDP SRTHVLADMP DDANQFYKAL
GIQNNDVFLE FNGVPIDPTN LSSIVFLGYD LDEGSPITVK VKRNGQDLEL KGAVKLNYAD
GDGFRFRDES KQSLNQAWLK N
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