Gene Dfer_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1553 
Symbol 
ID8225124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1852859 
End bp1853527 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content58% 
IMG OID644929411 
Producthypothetical protein 
Protein accessionYP_003085963 
Protein GI255035342 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.307001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG AAGAAGCGTT AGCAAAACTG GAATCGCTTG GGAACGAAAA GGTGCGCGCC 
ATGAATAAGA AGAATGGCGC GCACGATAAT CAGTTTGGCG TGAAAATGGG CGATATCCGG
TCCATCGCCA GCAAAATCAA ATCCGATCAG CAACTGGGCC TCGCCTTGTG GGACACGGGG
AATATCGAAG CGCAACTGCT GGCAATGCTG GTCATGAAGC CCAAGCTGCT GTCCGTCGGC
GAGCTCGACC GCCTCGTGCA CAGCGTCAAC TATTTCTGGG TGGCCGATTG GCTTTCTTCT
TACATTATCA AGGAGCATCC GCAAAAAGAG GAACTGCGCG AGGCCTGGAT GAATTCCGGT
TACCCCTGGG CTGCCCGCGC CGGGTGGAGC CTCACCGCCG GCCGCGTCAC CCGCGAACCC
GAAGGCCTCG ACATTCCCGG CCTGCTCGAC CGTATCGAAT CCGAAATGCC GACGGCCCCT
TCCGAGGCAC AATGGACGAT GAACACCACG CTGGCGCAAA TCGGCATCCA CTTTCCGGAG
CTTCGCGCCC GCGCGCTCGC AATAGGCGAG AAGCTCGGCA TTTACCGCGA TTACCCCGTT
TCCAAGGGTT GCACGTCACC CTTCGCGCCC ATTTGGATCA ATGAAATGGT GAGCCGGCAG
GGCAAATAG
 
Protein sequence
MTVEEALAKL ESLGNEKVRA MNKKNGAHDN QFGVKMGDIR SIASKIKSDQ QLGLALWDTG 
NIEAQLLAML VMKPKLLSVG ELDRLVHSVN YFWVADWLSS YIIKEHPQKE ELREAWMNSG
YPWAARAGWS LTAGRVTREP EGLDIPGLLD RIESEMPTAP SEAQWTMNTT LAQIGIHFPE
LRARALAIGE KLGIYRDYPV SKGCTSPFAP IWINEMVSRQ GK