| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1485 |
|---|
| Symbol | |
|---|
| ID | 8225056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1764185 |
|---|
| End bp | 1765492 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644929344 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_003085896 |
|---|
| Protein GI | 255035275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.409778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAACAA GACACATTCT CGCGCTGCTT GGCACACTTG TCGCCATCAT AGCGGCCCGG
TTTTATTTTA TCGAAACATT CGCCATCCGC CTTCCTTTCT GGGACCAGTG GGATGCGGAG
GGTGACTATC TGCTCAGGCC GTGGCTCGAA GGCCGGTTAC AACTTGCGCA CCTCTGGCAG
CCGCACAACG AACACCGGAT TTTCCCGACG CGCCTGCTGT CGCTGGCGAT ATTCAGCGCC
ACCGGCGTTT GGGATAACCT CACCGAAGCG CGGGTGAATA TCCTCGTGGC GGCGTGTATT
CCGCTTATGC TGCTCTTATT TCTCATGCGC CGGAATGCGC TCTACGGCCC GCGCTGGCTG
GTGCTGATCG TGATCATCGC CCAGTTTTCG CTGCCCTTCG CATTCGAAAA TCTGCTGGTA
GGTTTCCAGA GCCAGTTCTA TTTCCTGATC ATTTTCACCC TTGCCGGCAT TATCCTTGCC
ACATTATATC CCGAAAAGCC GCTGGCGATG GTCGGTGTGC TGGTGGTGTC ATGGCTGAGC
GTACTCACAA TGGCTTCCGG CATCCTCACG CCGCTTGCGG TAGCGGGTGT GTATGTGCTG
CGCAGCATTT CGGAAAGGGA GGTTAATGTG AAGCACGCGG TGCTGGCGGT TGTGCTCGTC
GCGCTCGCCG GACTGGGATA TTCGATTATG CCGAAAATCG AGGCTAACCA TATTTTTCGT
GCGCGGAGTG TCGGGGAGCT GTTCAGCGCG CTCCGGTACA TTCTCGCCTG GCCGGTGTCG
AAAAGCTGGC CGGCGGCCAT TGTGCTGTGG CTACCCGCAT TCGCGATGGT GCCCTGGTTA
CTGCGAAAGC GTGATTTGAC GCCAGCAGAC CTGTTTATGG CGGGATGCGT GATGTGGTCG
TTCGCGCAAA CGATCGCGAT CGCGTATGGG CGCGGGCAGT CGATGCTCAG CGTATCGTCG
CGGTACACGG AGCTGTTTAC ATTGGGCTTA ATCGGCAATG CGTGGTTTGC AGTGCGTTTC
ATTGAGATTT TTCGTAAAAA CTGGCGCATT GCCTGGCTGG GGGCGGTGTT CTTCGTGGTG
TTCGTGATGG GCCACATTAC CCGCAAAAAC AGCGATATGC GTGCCGTTCG CCAAACTCAC
GACCTGTCTT TAAAACAGGA TGCGAACGTG AGGAAATACC TGAAAACCCA CGATCCGGCG
ACACTCGTTC AGCCTCAGTT TGAAATTCCT TACCCGGATT CGATCCGTTT GCGGAGCCTG
CTGGATAATC CTACATTGAG GGGCATACTT CCTTTGGATA AGGATTAA
|
|---|
| Protein sequence | MQTRHILALL GTLVAIIAAR FYFIETFAIR LPFWDQWDAE GDYLLRPWLE GRLQLAHLWQ
PHNEHRIFPT RLLSLAIFSA TGVWDNLTEA RVNILVAACI PLMLLLFLMR RNALYGPRWL
VLIVIIAQFS LPFAFENLLV GFQSQFYFLI IFTLAGIILA TLYPEKPLAM VGVLVVSWLS
VLTMASGILT PLAVAGVYVL RSISEREVNV KHAVLAVVLV ALAGLGYSIM PKIEANHIFR
ARSVGELFSA LRYILAWPVS KSWPAAIVLW LPAFAMVPWL LRKRDLTPAD LFMAGCVMWS
FAQTIAIAYG RGQSMLSVSS RYTELFTLGL IGNAWFAVRF IEIFRKNWRI AWLGAVFFVV
FVMGHITRKN SDMRAVRQTH DLSLKQDANV RKYLKTHDPA TLVQPQFEIP YPDSIRLRSL
LDNPTLRGIL PLDKD
|
|---|
| |