| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1475 |
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| Symbol | |
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| ID | 8225046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1752729 |
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| End bp | 1753496 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644929334 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003085886 |
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| Protein GI | 255035265 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.059663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCG TAATCATTGA AGACGAGATC AAAACCGCAC GCTCGCTGGC GCAGCTGATT
ACCACGCTCC GGCCCGATGC GGAGATCGCC GCCACGATCC AAAGTGTGGA AAGGGCCATT
TCCTACCTCA CCGAAATGCC GCAGCCCGAC CTGATCTTCA TGGACATTCA GCTATCCGAC
GGTTTGTGTT TCGAAATTTT CGAATCGGTG AAAGTGGTGC CGCCGGTGAT ATTCTGCACA
GCGTACGACC ATTACGCGAT CGAGGCATTT AAAGCCAATG GCATCGATTA CCTGCTCAAA
CCTTTTAAAA AAGAGCACAT CGAGGGCGCG CTGTCCAGGC TCGATCAGTT GAAAAGCTAT
TTTTCAAGCG AAAAACCGCT CATTCCCGAC CTGGAAATGC TGCTGAAACG GCTCGCCGGG
CCCGAAGGCA AAAAGTCCTT TCTCGTTTTT AAACAAAATA AATACATCAC CATTAAAACC
GACACGATCG CATTCTTCTA CATTCACAAT GAAACCACCT GGCTGCGGAC GTTCGAAAAC
CAAGATTACA CCATTTCGCA GCCGCTGGAA GACGTGCAGG CGACGGTCGC CGCAGCGCAG
TTCTACCGGC TGAACCGGCA ATACCTGGTC AATTTCGATG CGGTGAAAGA AGTGGAGCAT
TACTTTTCGC GGAAGCTGTA CATCAAGCTG AGCGTCCCCA CACCCGAGAA ACTGCTGATC
GGAAAAGAGA AAGTGAGCCA TTTCCTCGGC TGGCTTGAAA ACCGGTGA
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| Protein sequence | MKIVIIEDEI KTARSLAQLI TTLRPDAEIA ATIQSVERAI SYLTEMPQPD LIFMDIQLSD
GLCFEIFESV KVVPPVIFCT AYDHYAIEAF KANGIDYLLK PFKKEHIEGA LSRLDQLKSY
FSSEKPLIPD LEMLLKRLAG PEGKKSFLVF KQNKYITIKT DTIAFFYIHN ETTWLRTFEN
QDYTISQPLE DVQATVAAAQ FYRLNRQYLV NFDAVKEVEH YFSRKLYIKL SVPTPEKLLI
GKEKVSHFLG WLENR
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