Gene Dfer_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1355 
Symbol 
ID8224926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1592627 
End bp1593994 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content55% 
IMG OID644929216 
Producthypothetical protein 
Protein accessionYP_003085768 
Protein GI255035147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.170203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAA TTATCAACGA CGACCTCGAC CAGCGATCGC AGCGCCCCGG TCCGAATGGT 
GCGCGACCGT TTTTTACCAG AGGCAATCCG GTCACCGTCA CCCGCGCCGA GCGCGACGGC
CGTGCATTGT GGTACATCAC GAGCGACGGC ACGAAGGTCA TCGCCAATAA GGTGGAACTG
AATGCCTACT CTGGCCTTTC GTCTGCCGAT CAGTCGCATT TCTTCGTTTG CTACCGCGCG
CAAACTGCCG GCGTGCCGGT GATCGAAATG GCGGATGCGC CCGACAGGCT ATTTTTTGCC
AACCTTCCAC CCTCGCCGAA CCGCGAATTC AAGGTGATGG AGCTGTTTCC AGAGGTTTGG
GCCACAGCCG TGACGCAAGC CGCGAGCCGC CTGCCCGAAT CCCGCAAGCA TGTTTTCGTT
TACATTCACG GTTTCGACTG GGAGCCTGGC CTTAAACTGG ATCTCGTGCC GCAGTTTGTA
CAAAGCTACC TGGCCCACCC GCAAAACAGT GTGGCCAATG TGCTTTACTT CGGGTGGCCG
TCGTACGGAT GGCGCAAAAA GGCCGACGAC CGTTCGATCG GCTACGGCGA GCAATTTACG
CGGAATGGTT TGTTCAAATA CTTCGAAGTG CTCTCCAGTA AACTGAAAGA AGCCGGAAAA
ACGCTTAACC TCGTCGTTCA TTCATTCGGC CACCAGCTAT TGAACGGCAT GGTCAACCCC
GGCGGCGGCC ACAGCATTCC TACCGGCATT TTTGAAAACA TATTCCTCAT GGCGCCGGAT
ATAACTCACC TGGCGGTACA AAAAGGCGGC GTGCAGCTCA GAAATATGCG CAGAAAGTTC
AAAGGGCCGC ATTTCCATTA CAATTACACC CCCTTGAAGC AACTCGCCAA AAACGTCCAC
ATTTACTACG ACCCGAGCGA TTACTTGCTG TACGTGAGCT CCAAGCAGTT CAACCTCAAT
GCAAATTCAG CCGCATTCGA TCCCCGCCCC GACGCCGAAG GCCTCACGAC CGACTTCCGC
AACCTGGGCA GCTACGGCGA CGAAATCTTT AAAAACGATC CCAATCTCCA ACTCGAAGAC
GGCTTCAACT TCTACAACGT ATTGGATATT ATCAAAAATA GCACCGATCC CGAGCCCGAC
CCGCTCTACT ACGGCTTCCT GGACAACACC GACGAAGCCA TGACCCAAGC CCGCGAAGGC
GATTACAGCG GCATTAAACT GCTTAGCACC TTCTGGGACC GGCATTTCCT CATGAACCAT
CATGCCTACC TATTCAGTTG CAGGCCAGTT GTCGCGCATG TGCTGGAAAG GCTGGCGGCG
ACAGCTCCTC AACCGGATAT CCGTGAGGAA GAGGCACCCA TTGTATAG
 
Protein sequence
MEGIINDDLD QRSQRPGPNG ARPFFTRGNP VTVTRAERDG RALWYITSDG TKVIANKVEL 
NAYSGLSSAD QSHFFVCYRA QTAGVPVIEM ADAPDRLFFA NLPPSPNREF KVMELFPEVW
ATAVTQAASR LPESRKHVFV YIHGFDWEPG LKLDLVPQFV QSYLAHPQNS VANVLYFGWP
SYGWRKKADD RSIGYGEQFT RNGLFKYFEV LSSKLKEAGK TLNLVVHSFG HQLLNGMVNP
GGGHSIPTGI FENIFLMAPD ITHLAVQKGG VQLRNMRRKF KGPHFHYNYT PLKQLAKNVH
IYYDPSDYLL YVSSKQFNLN ANSAAFDPRP DAEGLTTDFR NLGSYGDEIF KNDPNLQLED
GFNFYNVLDI IKNSTDPEPD PLYYGFLDNT DEAMTQAREG DYSGIKLLST FWDRHFLMNH
HAYLFSCRPV VAHVLERLAA TAPQPDIREE EAPIV