Gene Dfer_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1320 
Symbol 
ID8224891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1552016 
End bp1552525 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content52% 
IMG OID644929181 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003085733 
Protein GI255035112 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGG AAGCCGACTT GATCTCTGGT TGCCTCTTAA ATGACCGCAT TGCGCAGCGG 
CAGCTGTACG ACCGATACAA AAAGGCCATG TACACGCTAG CCTACCGCAT TACCGGTGAT
TTCGACGACG CCAACGATGT TTTGCAGGAT GCCTTTCTTG AGATATTCAA ACACCTGAAC
CAGTTCCGTG GCGAATCGAC GCTCGGGGCG TGGATCAAGC AGATCATCGT GCGGAAATCC
ATGAAGAAGA AACGGCTGGT GATCTGGGAG AATGTGGAGG GTTACATGGG CGAGAGCATC
GACTGGGGCG AATCGGAGAT CAATGCCGCA CATCTGGAAA CAGCCATTCT GTCGCTACCC
GACGGTTTTC GTACAATCTT CGTCCTGGCC GAAGTGGAGG GATACACGCA CCGGGAGATT
GCCGTAATGC TCAAAATTTC GGAAGGAACT TCGAAGTCAC AGCTGTTTCA TGCCAAAAGA
AAACTCCGGA CAATGCTTTC GGCAAACTGA
 
Protein sequence
MTSEADLISG CLLNDRIAQR QLYDRYKKAM YTLAYRITGD FDDANDVLQD AFLEIFKHLN 
QFRGESTLGA WIKQIIVRKS MKKKRLVIWE NVEGYMGESI DWGESEINAA HLETAILSLP
DGFRTIFVLA EVEGYTHREI AVMLKISEGT SKSQLFHAKR KLRTMLSAN