| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1280 |
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| Symbol | |
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| ID | 8224851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1508293 |
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| End bp | 1511340 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929141 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003085693 |
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| Protein GI | 255035072 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0152278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.38856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATGCTT TCGAACTAAC CTCTGTCCCG TCAAACCAGG TGGCCTTTGT TAAATGTCTG
TGTGTTGGTC TGTTTGCGCT GCTGGCGGCG GGTTCCCTAT GCCGCGGGCA GTTGCCGGAT
TTCAATGTGC AGCTGCTCGA CGACCAGAGC AGCATCCAGA CGGCCAATGC GTCGAGGATC
ATCCGCGACC GCCACGGGTT TCTCTGGGTC CTTTCGCCAA GGCACATTCA GCGTTTCGAC
GGCCAGAATG TGCGCCGGAT CGAAACGCAG GGCGAAAACC TGCTCGATAT CGCAGCCGAC
AGCTCCGGCA CGGTTTGGAC GGCGTCGGGC AGCGGCATCC GCAACTACCG TATCGGCGAC
CGTTCACTGC GAAAAATTCC TCTAACCGGC CCCGCCATTG CACCACTCAA CAAGCTGAAC
AAATTGCAGG TAACCCCCGA CAACCGGGTA TGGGCCAATG CAGGCCGCGG CCTGTACCGC
TACGATCCTC GCGCCGGCTC CTTCCGCTTC GTTCCAATGG CTGGGCTTGA AAACCATTAC
TTTTACCGGC GGATTTTCAG CAGGAAAGAT TATCAGCTGT ACCTGGCGGA TGTGCGAACG
GTATTCTGCC ACGATACGCG CACCGGACGC ACGCGCCGGG CCGCATTCGC GGATGTGCGG
GCAGTGGTGC CTGTGAGCGA CGATGTGGTG TGGGCGAGCA ACAATCTGTT ACAGACGTTT
GAAATCAACT TCGCTTCGGG AAATGTGCGG CAAATCGCTC CGGCCGATGC GAACAACCCG
GAAGGAATTC CGCTTGCGGA GCTGATCAGC ATTACACCGC TGGACGGTGA CAGAAAACTC
GTGAATACTA CCAAAGGCTG CTTTTTGCAC CACATTCACC GCCGGACATT CACCCGCGCC
ACGCTCTTCG ACTCCGGTAA GCCGCTGCCG AATGATGAGA ATTACGCCGA CTTTCATGAT
CAGAACGGGA CGCAATGGAT ACTTTCCCCG GAAGGCATCC TGTTTTTCAG GCCGCTGGCG
CATACCGTCG GCTGGCTCAA TGGCGTCAGC GATCCTGGTT TGAGCAATAA TGTCAAATCC
ATCGCCGAGG ATGCGCAGGG AAATATCTGG CTCGGTACGT CCCGCGGGCT GGCGGTGCTG
GATATTCGCA GCGGTAAGGT GAATGCTGTG AAGCTGCCTG GCCGTAGGGA CGGGCATTTG
GGGGAGGTAA GAGGGCTGAT TTTTGATGGA AAGCACCTGC TCGTGGCGGC CAGCGGCGCA
TTGCCCATGC TGGTTGATCC GGTGCGCAAA ACTTTCGCCG ATTTGCATTA CCCTGCCGGG
GTGAAAGGGG AGGCCCTCCG CTCCAAACTG AACGACGATG CCGTTGGAAC CATGATCAGA
AAGGCCGATG GGAATTTCCT TATTATGGGC GAACTGGGCT GCTACGAAGT GCGGGCCGGA
TCCTACCAAA TTGCGGAAAT ACCTGTCGAG GGATTTGAAA AACTGATCCA GACCGTGGCC
CGCGACGCGA ACGGGCATCA CTGGATGGGA ACTTACCAGG GCTTGCTCGT TACGGATCAG
GACTTTCGGA ATGCGCTCTC GGATAGCGGT TTCGCTCCGG GAAAGCTTGT GGGAGCGGTG
CTCGTCCGGA ACGATTCTAC GGCATGGTGC GGCTCGGTGG GCGTTTACGA AGTAGTGAAA
AGCGGACGTT CGCTCCGCAA ACGCAAAATC TTTCCCGAAC TGGCCAACCA GCGGATTTCG
ATGATCCACC GCGACAAAGG CGGGCGGATA TGGATCGGCG GCGATGACGG CCTTTACCTG
CTCAATCCGA ATGCCGACAA GCTGCAATGG TTCGATTTCA GGGATAACAT TCAAAACAAA
CCTTTCAATA GCAATGCTGT GCTCGAAGCG GCTGACGGCC GGATGTACGT CGGCGGCTTG
AACGGATTGA ACTATTTCGA TCCGGCGCTC CTGAAACACC GCGAAGAAAA ACTGAATGTG
ATCATCGCCG CCGTAACCGC GAACCAGGAC GATTCCCTGC TCACCGAAAC CGCAGCGCCG
CTCACGCTCG ACTGGACGCA GAATTCCGTG GAAATCCAGT ATCTGACACC CTATTTCAGA
AACCCGGGCA AACTCATGTA CCGGTACCGC CTCAGCGGGC TCGACGACGC CTGGACGGAC
AATGCGCGCA ACAGCCGGGT GAGGTTCACG TCGCTGCCGC CTGGTTCGTA CACCTTCTCG
GTCGCTGCCA GCCTGGACGG GCTCACATGG TCGGAAACGG CAAGGCCATT GTCCTTCGTG
ATTTTGCGGC CCTGGTGGAA AACGTGGTGG TTCACGGCGG CTTTGCTTCT GGCGGCAGGT
GGACTTGCTT ATTGGCTTTT CAAACGGAGG TTATGGGTTA TCAAGCGCCA AACCGCATTG
CGGGAACACA TGGCCGAACT GGAAATGCGG GCATTGCGCG CGCAAATGAA CCCGCATTTT
ATATTTAATT GCCTCAATTC CATTAACCGA TACATCGTCA AAAGCGACAA TGCGACGGCG
TCGCTTTACC TGACGCGTTT TGCCAAACTA ATACGGCTTA TCCTCGACAA CTCCAATAGC
AAGAAAGTGC TGCTTTCCAA CGAGCTGGAA GCCTTGAAGT TATACATCGA AATGGAGCGG
ATACGGTTTG ATAACCAATT CGACTATCAG TTTATGCTCG GAGAAGACGT GCATCCCGAC
TCAATCGAAG TTCCATCGCT GATCATCCAG CCCTATGTCG AGAATGCGAT CTGGCACGGG
TTGCTGCACA AGGAGAGTCA CGGGAGCCTT TGGATCAGGA TCAGGATGCT GGACGAATGC
ACGCTGGAAT GCATCGTGGA AGATAATGGC GTGGGGCGCG GGAAGGCGGC GGAATTCCGC
AGCAAGTCGG CTACCGGGAA GAAGTCGCTG GGCATGAAAC TCACCGAGGA CCGCATTGCG
GTGCTCAACC AATATGCCCG CACGAATGCG AGTGTCGCCA TTGTGGACCT GGTCGACGAC
CTCGGCCAAG CCGCAGGAAC GCGGGTGATT GTCAAAATCC CTGTTTGA
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| Protein sequence | MHAFELTSVP SNQVAFVKCL CVGLFALLAA GSLCRGQLPD FNVQLLDDQS SIQTANASRI
IRDRHGFLWV LSPRHIQRFD GQNVRRIETQ GENLLDIAAD SSGTVWTASG SGIRNYRIGD
RSLRKIPLTG PAIAPLNKLN KLQVTPDNRV WANAGRGLYR YDPRAGSFRF VPMAGLENHY
FYRRIFSRKD YQLYLADVRT VFCHDTRTGR TRRAAFADVR AVVPVSDDVV WASNNLLQTF
EINFASGNVR QIAPADANNP EGIPLAELIS ITPLDGDRKL VNTTKGCFLH HIHRRTFTRA
TLFDSGKPLP NDENYADFHD QNGTQWILSP EGILFFRPLA HTVGWLNGVS DPGLSNNVKS
IAEDAQGNIW LGTSRGLAVL DIRSGKVNAV KLPGRRDGHL GEVRGLIFDG KHLLVAASGA
LPMLVDPVRK TFADLHYPAG VKGEALRSKL NDDAVGTMIR KADGNFLIMG ELGCYEVRAG
SYQIAEIPVE GFEKLIQTVA RDANGHHWMG TYQGLLVTDQ DFRNALSDSG FAPGKLVGAV
LVRNDSTAWC GSVGVYEVVK SGRSLRKRKI FPELANQRIS MIHRDKGGRI WIGGDDGLYL
LNPNADKLQW FDFRDNIQNK PFNSNAVLEA ADGRMYVGGL NGLNYFDPAL LKHREEKLNV
IIAAVTANQD DSLLTETAAP LTLDWTQNSV EIQYLTPYFR NPGKLMYRYR LSGLDDAWTD
NARNSRVRFT SLPPGSYTFS VAASLDGLTW SETARPLSFV ILRPWWKTWW FTAALLLAAG
GLAYWLFKRR LWVIKRQTAL REHMAELEMR ALRAQMNPHF IFNCLNSINR YIVKSDNATA
SLYLTRFAKL IRLILDNSNS KKVLLSNELE ALKLYIEMER IRFDNQFDYQ FMLGEDVHPD
SIEVPSLIIQ PYVENAIWHG LLHKESHGSL WIRIRMLDEC TLECIVEDNG VGRGKAAEFR
SKSATGKKSL GMKLTEDRIA VLNQYARTNA SVAIVDLVDD LGQAAGTRVI VKIPV
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