Gene Dfer_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1257 
Symbol 
ID8224828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1488116 
End bp1488634 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID644929119 
ProductDinB family protein 
Protein accessionYP_003085671 
Protein GI255035050 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.577777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.312522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTA ACAACACCGC ACAGGAGATC ACAGCCACCA CGTACATTAT CAGCGCCGAT 
GCATTACTGG AACATTGGCA AGGCCACCGC AGGCTCAGCC GGAAGGTTAT TGAGGCATTT
CCTGAGGATC AGTTTTATAC TTTTTCGATC GGCGGCATGC GTACTTACGC CGAGCTTACG
ATGGAAATGA TCGGTCTGGC GGCTCCCGGC ATCCGCGGTA TCGCATTCGG CGACTGGACT
TTCAGCGAGC CGGTACTCGA CTACTCGACG CCCGCCCCGG CCACCAAACC CGAAGTGCTC
AACCTGTGGG ACCTTATTAC GGAATACATC AACAACGTGT GGCCGCAAAT CCCGCCACAA
CGCTTCCAGG AAGTAGAAGC TGCCTTTGGC ATGTATGAAG ACAAGATCGT CGGAACAGTC
CAGTACCTGA TCGACAATGA AATTCACCAC CGTGCGCAAG GCTACGTGTA CCTGCGCGCC
CTGGGCGTGG AGCCACCGGC TTTCTGGGAT CGCCAATAG
 
Protein sequence
METNNTAQEI TATTYIISAD ALLEHWQGHR RLSRKVIEAF PEDQFYTFSI GGMRTYAELT 
MEMIGLAAPG IRGIAFGDWT FSEPVLDYST PAPATKPEVL NLWDLITEYI NNVWPQIPPQ
RFQEVEAAFG MYEDKIVGTV QYLIDNEIHH RAQGYVYLRA LGVEPPAFWD RQ